Pairwise Alignments

Query, 526 a.a., putative Opine ABC transporter, periplasmic binding protein from Pseudomonas putida KT2440

Subject, 504 a.a., ABC transporter substrate-binding protein from Dickeya dianthicola ME23

 Score =  135 bits (340), Expect = 4e-36
 Identities = 131/488 (26%), Positives = 217/488 (44%), Gaps = 34/488 (6%)

Query: 11  SALAALVTLSGISPLALAQDSARATISVSPGIADITSLDPHRASLVGDKGIVAEMFNALV 70
           +A   L+ LS +S LA A     A I       D T+ DP +++   D  + + +F+ L+
Sbjct: 9   AAAGVLLALSLVSELAQA-----AGILTIGRREDSTTFDPIKSAQNADNWVFSNVFDVLI 63

Query: 71  RFPPGSSDPAALEADLAERWESSDDKKVWTFFLRKGVMFHGGYGELKAADVVYSLQRAAD 130
           R     +    LE  LA+ W  S D KV+TF LR+     G    + A D V+SL R  D
Sbjct: 64  RVDKTGT---TLEPGLAQHWTVSPDGKVYTFTLREARFSDGS--PVTAQDAVFSLSRIRD 118

Query: 131 PKRSSFSANFTALEKVEALDDYTVKVTLKYPDTAFLGRVSNYHGGQIVSKAAAEKLGER- 189
            K S +  +++ ++ + A D +T+ VTLK P   FL +++      ++ +    +LGE  
Sbjct: 119 SKESLWRDSYSIIDTLAAPDAHTLVVTLKSPSAPFLSQLA-LPNASVLPENIVHRLGEET 177

Query: 190 YGQAPIGTGPFAFSEHITQQYVKLVANDQYFRG-KPKLGAIVYRMIPSDSARELAFASDE 248
           + + P+G+G F          + L  N  Y++     L  + ++ IP D+ R L   + E
Sbjct: 178 FAEKPVGSGAFVIQSWARGDKIVLTKNPYYWQADHVSLDGVEWQTIPDDNTRMLKVQAGE 237

Query: 249 LDLMLGKREQRWVERSRARGVNVDVFEPAEFRTLFLNRNIKPLDDVKVRQAIAASVNINE 308
           LD  L     R     +   + V          L +N     L  V+VRQA+  +++ + 
Sbjct: 238 LDAALSVPFSRLASLQKDPNLKVTQDPSTREDHLLINHAHGLLGKVEVRQALDYAIDKSA 297

Query: 309 IIRYAGKDVADGGCSIIPNGYQGLDCSAGPYAYDPAHAKALLASAGYPNGLKLKSVVSNA 368
           I++    +      S +P G            YDP  AK +L +AG  +GL L  VV NA
Sbjct: 298 IVKTVTFNYGTVANSYLPKGALYFYADNLQRPYDPEKAKQMLKAAG-ASGLTLNYVV-NA 355

Query: 369 APQL--PIMEIIQAQLAKAGITLEMEVVDHATYQAKSRQDQSAIVFYGAARYP-GADYWL 425
             ++   I  ++Q QLAKAG+ + ++ VD +       Q+ S +V   A  +    +YW 
Sbjct: 356 GDEVDEQIAVLLQQQLAKAGVAVNLQKVDPS-------QNWSMLV---AGDFDLSVNYWT 405

Query: 426 TEFYD----SASAIGAPAAMSNFGHC--SVADDAIRKARVEADPQTQLDLWKKAQVQIHD 479
            +  D    +   +G  + M+             +  ARVE DP+ +  ++   Q    D
Sbjct: 406 NDILDPDQKTTFVLGHDSNMNYMTRYQNDKVKALVAAARVEMDPKKREQMYIDLQKMAKD 465

Query: 480 DVCAIPLF 487
           DV  I L+
Sbjct: 466 DVNWIDLY 473