Pairwise Alignments

Query, 526 a.a., putative Opine ABC transporter, periplasmic binding protein from Pseudomonas putida KT2440

Subject, 535 a.a., ABC transporter substrate-binding protein from Dickeya dadantii 3937

 Score =  147 bits (371), Expect = 1e-39
 Identities = 125/456 (27%), Positives = 206/456 (45%), Gaps = 50/456 (10%)

Query: 65  MFNALVRFPPGSSDPAALEADLAERWESSDDKKVWTFFLRKGVMFHGGYG-----ELKAA 119
           ++N LV F  G+++   +E  LAE+W+ S D K +TF LRK V +             A 
Sbjct: 60  IYNRLVEFKNGTTE---IEPGLAEKWDISADGKTYTFHLRKDVKWQDNKEFKPSRTFNAD 116

Query: 120 DVVYSLQRAADPKRSSFSANFTALE------------KVEALDDYTVKVTLKYPDTAFLG 167
           DV++S QR  D        +  + E            K+E +DDYTV+  L   +  FL 
Sbjct: 117 DVLFSFQRQMDANHPFHKVSGGSYEYFEGMGMPDLISKIEKVDDYTVRFQLTRAEAPFLA 176

Query: 168 RV--------SNYHGGQIVSKAAAEKLGERYGQAPIGTGPFAFSEHITQQYVKLVANDQY 219
            +        S  +G +++   + EK+       PIGTGPF   ++     +     D +
Sbjct: 177 DLAMDFASIMSAEYGDKMLKAGSPEKID----LDPIGTGPFQLQQYQKDSRILYKRFDSF 232

Query: 220 FRGKPKLGAIVYRMIPSDSARELAFASDELDLMLGKREQRWVERSRARGVNVDVFEPAEF 279
           +  KP +  +V+ + P  S R      DE  +M            + +  N+++ +    
Sbjct: 233 WGTKPGIDRLVFSITPDASVRYAKLQKDECQVMPYPNPADLASMKQDK--NIELLQKPGL 290

Query: 280 RTLFLNRNI--KPLDDVKVRQAIAASVNINEIIRYAGKDVADGGCSIIPNGYQGLDCSAG 337
              +L+ N+  KPLD+VKVRQA+  +VN   II    +       ++IP    G +    
Sbjct: 291 NVGYLSFNVEKKPLDNVKVRQALTYAVNKQAIIEAVYQGAGQAAKNLIPPTMWGYNDDVK 350

Query: 338 PYAYDPAHAKALLASAGYPNGLKLKS-VVSNAAPQLP----IMEIIQAQLAKAGITLEME 392
            YAYDPA AKALL  AG  NG ++    +    P  P    + E+IQA  AK G+  ++ 
Sbjct: 351 DYAYDPAKAKALLKEAGLENGFEIDLWAMPVQRPYNPNARRMAEMIQADWAKVGVKAKIV 410

Query: 393 VVDHATY--QAKSRQDQSAIVFYGAARYPGADYWLTEFYDSASAIGAPAAMSNFGHCSVA 450
             +   Y  +AK+ + Q+ ++ +        ++  T F   A+  G     SN+      
Sbjct: 411 TYEWGEYLKRAKAGEHQTVLMGWTGDNGDPDNFLATLFSCDAAKKG-----SNYSKWCYK 465

Query: 451 --DDAIRKARVEADPQTQLDLWKKAQVQIHDDVCAI 484
             +D I+ AR  +D   +++L+K+AQV +HD   A+
Sbjct: 466 PFEDLIQPARAVSDQAKRIELYKQAQVVMHDQAPAL 501