Pairwise Alignments

Query, 526 a.a., putative Opine ABC transporter, periplasmic binding protein from Pseudomonas putida KT2440

Subject, 535 a.a., dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor from Escherichia coli BL21

 Score =  155 bits (392), Expect = 4e-42
 Identities = 139/513 (27%), Positives = 225/513 (43%), Gaps = 45/513 (8%)

Query: 1   MKALGLTLRSSALAALVTLSGISPLALAQDSARATISVSPGIADITSLDPHRASLVGDKG 60
           +K  G+     +L A+   + +    L   S  +    +P +   TS   + AS V    
Sbjct: 5   LKKSGMLKLGLSLVAMTVAASVQAKTLVYCSEGSPEGFNPQL--FTSGTTYDASSV---- 58

Query: 61  IVAEMFNALVRFPPGSSDPAALEADLAERWESSDDKKVWTFFLRKGVMFHGGYG-----E 115
               ++N LV F  G+++   +   LAE+WE S+D K +TF LRKGV +H         E
Sbjct: 59  ---PLYNRLVEFKIGTTE---VIPGLAEKWEVSEDGKTYTFHLRKGVKWHDNKEFKPTRE 112

Query: 116 LKAADVVYSLQR---AADPKRSSFSANFTALE---------KVEALDDYTVKVTLKYPDT 163
           L A DVV+S  R   A +P       ++   E         +V+ +DD TV+  L  P+ 
Sbjct: 113 LNADDVVFSFDRQKNAQNPYHKVSGGSYEYFEGMGLPELISEVKKVDDNTVQFVLTRPEA 172

Query: 164 AFLGRVSNYHGGQIVSKAAAEKL-----GERYGQAPIGTGPFAFSEHITQQYVKLVANDQ 218
            FL  ++      I+SK  A+ +      E+    PIGTGPF   ++     ++  A D 
Sbjct: 173 PFLADLA-MDFASILSKEYADAMMKAGTPEKLDLNPIGTGPFQLQQYQKDSRIRYKAFDG 231

Query: 219 YFRGKPKLGAIVYRMIPSDSARELAFASDELDLMLGKREQRWVERSRARGVNVDVFEPAE 278
           Y+  KP++  +V+ + P  S R      +E  +M            + + +N+       
Sbjct: 232 YWGTKPQIDTLVFSITPDASVRYAKLQKNECQVMPYPNPADIARMKQDKSINLMEMPGLN 291

Query: 279 FRTLFLNRNIKPLDDVKVRQAIAASVNINEIIRYAGKDVADGGCSIIPNGYQGLDCSAGP 338
              L  N   KPLDDVKVRQA+  +VN + II+   +       ++IP    G +     
Sbjct: 292 VGYLSYNVQKKPLDDVKVRQALTYAVNKDAIIKAVYQGAGVSAKNLIPPTMWGYNDDVQD 351

Query: 339 YAYDPAHAKALLASAGYPNGLKLKS-VVSNAAPQLP----IMEIIQAQLAKAGITLEMEV 393
           Y YDP  AKALL  AG   G  +    +    P  P    + E+IQA  AK G+  ++  
Sbjct: 352 YTYDPEKAKALLKEAGLEKGFSIDLWAMPVQRPYNPNARRMAEMIQADWAKVGVQAKIVT 411

Query: 394 VDHATYQAKSRQDQSAIVFYGAARYPGADYWLTEFYDSASAIGAPAAMSNFGHCSVA--D 451
            +   Y  +++  +   V  G   + G +     F+ +  +  A    SN+        +
Sbjct: 412 YEWGEYLKRAKDGEHQTVMMG---WTGDNGDPDNFFATLFSCAASEQGSNYSKWCYKPFE 468

Query: 452 DAIRKARVEADPQTQLDLWKKAQVQIHDDVCAI 484
           D I+ AR   D   +++L+K+AQV +HD   A+
Sbjct: 469 DLIQPARATDDHNKRVELYKQAQVVMHDQAPAL 501