Pairwise Alignments

Query, 375 a.a., opine oxidase subunit B from Pseudomonas putida KT2440

Subject, 397 a.a., putative D-amino acid dehydrogenase 2 small subunit from Pseudomonas putida KT2440

 Score = 49.7 bits (117), Expect = 1e-10
 Identities = 59/210 (28%), Positives = 87/210 (41%), Gaps = 24/210 (11%)

Query: 125 SAHMLDRAELLRRFPTMKIGKAVVGASF--GEFDG--HANPLRLLAAMQKAFMARGGQLQ 180
           S  +L  AEL    P +  G   VG  F  GE  G  H   LRL A ++ +   R     
Sbjct: 162 SQQVLAAAELRGLEPALD-GAPFVGGVFTAGEEVGDCHVFCLRLEALLRASGQCR---FL 217

Query: 181 NNRPVTDIRRLSGGGFEVQSGEYRAQCERIVIAAGLGCAALGPMVGLNVPIRPQRGQLLV 240
             RPVT + +  G    +Q G+ +   E++V+ AG     L  + G+ +P+ P +G  L 
Sbjct: 218 LGRPVTQLVQRQGQVVALQLGDQQLDVEQLVLCAGHRGPGLA-LPGVQIPVYPLKGYSLT 276

Query: 241 TERLAPLLP-----------IPGSGLRQTAEGTVMIGVTQEEVGFDLATTTEGAARITRK 289
               A  LP           I  + L Q      M+ +    VGFD +        + R 
Sbjct: 277 APISAGHLPPEVSLTDYERKIVYARLGQQLRVAAMVDI----VGFDESVDMRRLQSMRRL 332

Query: 290 ALKILPDLAQAKLVRQWSCLRIMTPDGNPV 319
           AL+ LP  A      +W+ +R  TP G P+
Sbjct: 333 ALETLPRAADYGQAVEWAGMRPATPTGVPI 362