Pairwise Alignments

Query, 290 a.a., putative Opine ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 303 a.a., peptide transporter from Pseudomonas simiae WCS417

 Score =  225 bits (574), Expect = 8e-64
 Identities = 116/278 (41%), Positives = 178/278 (64%), Gaps = 6/278 (2%)

Query: 16  WQALFQNRLSWIGIGLLVMIVLVALFAPLIAPYDPLQQNIAYRLEPPS------AEFWLG 69
           WQA  +N+ +  G+  +++IV  A+FAP +AP++P +Q   + L PP+       +F LG
Sbjct: 24  WQAFSKNKGAVAGLLFMLLIVFCAIFAPWVAPHNPSEQYRDFLLTPPAWLEGGQMQFLLG 83

Query: 70  TDTYGRDVLSRLIYGTRVSLLVGFVAVMIAMVVGSALGVIAGYVGGITDRLITGFVDVLL 129
           TD  GRD+LSRLI G+R+SLL+G  +V+++++ G  LG+ AG+   +    I   +D++L
Sbjct: 84  TDELGRDLLSRLIQGSRLSLLIGLSSVVMSLIPGILLGLFAGFFPRLLGPTIMRLMDIML 143

Query: 130 SFPTLLLGLMVAAMLGASLENLIIAIAITEIAPFVRIARAPTIALKQRDFVEAGRSLGYG 189
           + P+LLL + + A+LG  L N +IAIAI  +  +VR+ RA  +    RD+V A R  G G
Sbjct: 144 ALPSLLLAVAIVAILGPGLINTVIAIAIVSLPSYVRLTRAAVMGELNRDYVTAARLAGAG 203

Query: 190 PGRLMTVHILPNMISEVLVLGALWMATAIRTEASLSFIGLGVPPPAPTWGSMIREGFENI 249
             RLM + +LPN ++ ++V   L  ++AI   A+L F+GLGV PP P WG+M+    + I
Sbjct: 204 LPRLMFITVLPNCMAPLIVQATLSFSSAILDAAALGFLGLGVQPPTPEWGTMLASARDYI 263

Query: 250 LDAWWLTVFPSLAILLTVLALSLLGDALRDANDPKTRS 287
             AWW+   P L ILL+VLA++L+GD LRDA DPK ++
Sbjct: 264 ERAWWVVSLPGLTILLSVLAINLMGDGLRDALDPKLKN 301