Pairwise Alignments

Query, 290 a.a., putative Opine ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 271 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  218 bits (556), Expect = 9e-62
 Identities = 109/259 (42%), Positives = 166/259 (64%)

Query: 27  IGIGLLVMIVLVALFAPLIAPYDPLQQNIAYRLEPPSAEFWLGTDTYGRDVLSRLIYGTR 86
           IG  L+ +++++A+ A +  PY+PL  ++  +L+PPS   WLGTD +GRDV SR + G  
Sbjct: 10  IGGVLIAVLLVLAVVAAVWTPYNPLAIDLRSKLQPPSMAHWLGTDEFGRDVASRAMQGAA 69

Query: 87  VSLLVGFVAVMIAMVVGSALGVIAGYVGGITDRLITGFVDVLLSFPTLLLGLMVAAMLGA 146
            S LV  + V +A  +G  +GV+AG+V G TDR++  F D LL+FP LLL L V  ++GA
Sbjct: 70  TSCLVALLTVTLATAIGLVVGVVAGFVRGWTDRVLMAFNDTLLAFPGLLLALGVMVIVGA 129

Query: 147 SLENLIIAIAITEIAPFVRIARAPTIALKQRDFVEAGRSLGYGPGRLMTVHILPNMISEV 206
           +   +++A+++      VR+ R   ++L++R++VEA R +G      M  HILPN ++ V
Sbjct: 130 NKWGIVLALSMAYAPSVVRVVRGTVLSLREREYVEASRMIGNSELYTMWRHILPNCVAPV 189

Query: 207 LVLGALWMATAIRTEASLSFIGLGVPPPAPTWGSMIREGFENILDAWWLTVFPSLAILLT 266
            VL        + +E++LSF+GLGVPPPAPTWG+M+      +  A WL V P L I LT
Sbjct: 190 AVLATSMFGWVLLSESALSFLGLGVPPPAPTWGNMLASARPYMASAVWLCVVPGLCIALT 249

Query: 267 VLALSLLGDALRDANDPKT 285
           +L ++LLG++LRD  DP+T
Sbjct: 250 LLGINLLGESLRDRLDPRT 268