Pairwise Alignments

Query, 290 a.a., putative Opine ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 301 a.a., Dipeptide ABC transporter, permease protein DppC (TC 3.A.1.5.2) from Variovorax sp. SCN45

 Score =  244 bits (624), Expect = 1e-69
 Identities = 126/277 (45%), Positives = 182/277 (65%), Gaps = 6/277 (2%)

Query: 16  WQALFQNRLSWIGIGLLVMIVLVALFAPLIAPYDPLQQNIAYRLEPP------SAEFWLG 69
           W A   NR + IG+  +++++LVA+FAP IAP+ P + N A  L+PP      S  + LG
Sbjct: 24  WAAFSANRGAVIGLVTIILLMLVAMFAPWIAPHAPNETNSAVFLQPPAWQQGGSTSYLLG 83

Query: 70  TDTYGRDVLSRLIYGTRVSLLVGFVAVMIAMVVGSALGVIAGYVGGITDRLITGFVDVLL 129
           TD  GRD+LSRL+YG R+SL +G   V +++VVG  LG+IAG+  G+ +  I   +D++L
Sbjct: 84  TDAIGRDILSRLMYGARLSLSIGVAVVALSVVVGVVLGLIAGFFRGVLEIAIMRLMDIVL 143

Query: 130 SFPTLLLGLMVAAMLGASLENLIIAIAITEIAPFVRIARAPTIALKQRDFVEAGRSLGYG 189
           + P+LLL +++ A+LG  L N ++A+AI  +  +VRI RA  IA   RD+V A R  G G
Sbjct: 144 TLPSLLLAIVIVAILGPGLVNAMLAVAIVVLPHYVRITRAAVIAEVSRDYVTAARVSGAG 203

Query: 190 PGRLMTVHILPNMISEVLVLGALWMATAIRTEASLSFIGLGVPPPAPTWGSMIREGFENI 249
             RLM   +LPN  + ++V  +L ++TAI   A+L F+GLG  PP+P WG+M+ +  E +
Sbjct: 204 TLRLMFREVLPNCAAPLIVQASLGISTAILDAAALGFLGLGAQPPSPEWGTMLADAREFV 263

Query: 250 LDAWWLTVFPSLAILLTVLALSLLGDALRDANDPKTR 286
           L AWW+  FP LAIL+ VLA +LLGD LRDA DPK +
Sbjct: 264 LRAWWVVTFPGLAILMAVLAFNLLGDGLRDALDPKLK 300