Pairwise Alignments

Query, 290 a.a., putative Opine ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 274 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  207 bits (528), Expect = 2e-58
 Identities = 109/268 (40%), Positives = 167/268 (62%), Gaps = 1/268 (0%)

Query: 19  LFQNRLSWIGIGLLVMIVLVALFAPLIAPYDPLQQNIAYRLEPPSAEFWLGTDTYGRDVL 78
           L   R+  +   +L++I ++A+ APL A  DP    +  RL+ PSAE  LGTD  GRD+ 
Sbjct: 5   LMHRRIVMVSALVLLVIAVMAIGAPLFASADPNDTAVLERLKAPSAEHLLGTDELGRDMY 64

Query: 79  SRLIYGTRVSLLVGFVAVMIAMVVGSALGVIAGYVGGITDRLITGFVDVLLSFPTLLLGL 138
           SR+++G R SL +  +  + A+V G+ LG++AG+   + D  +   VD ++SFP +LL +
Sbjct: 65  SRIVHGARYSLAIAALTALGAVVAGTVLGLMAGFFRRL-DAPLMRVVDAMMSFPDILLAI 123

Query: 139 MVAAMLGASLENLIIAIAITEIAPFVRIARAPTIALKQRDFVEAGRSLGYGPGRLMTVHI 198
            + A+LG SL N ++A+ +       R+ RA T+ +++  FVEA R+LG    R++  HI
Sbjct: 124 ALVAILGPSLVNTVLALVLVYTPRVARVVRASTLVVRELLFVEAVRALGVRTSRILWRHI 183

Query: 199 LPNMISEVLVLGALWMATAIRTEASLSFIGLGVPPPAPTWGSMIREGFENILDAWWLTVF 258
           LPN++S +LV  +   A AI  EA LSF+G+GVPP  PTWG+M+    +    A+W+ +F
Sbjct: 184 LPNLMSPILVQVSFIFAYAILAEAGLSFLGVGVPPEIPTWGTMVAGSQQYAHQAFWVVLF 243

Query: 259 PSLAILLTVLALSLLGDALRDANDPKTR 286
           P LAI+ T L+L LLGD +RD  DPK +
Sbjct: 244 PGLAIIFTALSLQLLGDGVRDLLDPKLK 271