Pairwise Alignments

Query, 290 a.a., putative Opine ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 298 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  230 bits (586), Expect = 3e-65
 Identities = 118/257 (45%), Positives = 160/257 (62%)

Query: 28  GIGLLVMIVLVALFAPLIAPYDPLQQNIAYRLEPPSAEFWLGTDTYGRDVLSRLIYGTRV 87
           G+ +L  +VL ALFAP +AP+DP  QN+  RL PP A  WLGTD  GRD+LSR+IYGTR 
Sbjct: 40  GLVILAAMVLAALFAPWLAPFDPNAQNVQQRLLPPGAAHWLGTDQLGRDLLSRVIYGTRP 99

Query: 88  SLLVGFVAVMIAMVVGSALGVIAGYVGGITDRLITGFVDVLLSFPTLLLGLMVAAMLGAS 147
           +LL+  +  +++  +G  LG+ AGY GG  D L+    D+ ++FP L+L L + A+LG  
Sbjct: 100 TLLIVSLVALLSAPLGLLLGMCAGYFGGWIDTLLMRVTDIFMAFPRLVLALALVAVLGPG 159

Query: 148 LENLIIAIAITEIAPFVRIARAPTIALKQRDFVEAGRSLGYGPGRLMTVHILPNMISEVL 207
           + N +IAIAIT    + RIAR  T  ++  DF++A R  G  P R++  H+LP  +   +
Sbjct: 160 IVNAVIAIAITAWPAYARIARTETRTVRGSDFIQAARVQGLRPARILFGHLLPICLPSTV 219

Query: 208 VLGALWMATAIRTEASLSFIGLGVPPPAPTWGSMIREGFENILDAWWLTVFPSLAILLTV 267
           V   L MA  I T A L F+GLG  PP   WG+MI  G + I D WW+   P +AILL  
Sbjct: 220 VRVTLDMAGIILTAAGLGFLGLGAQPPMSEWGAMISTGRQYIFDQWWVAAVPGVAILLGS 279

Query: 268 LALSLLGDALRDANDPK 284
           LA +L+GD LRD  DPK
Sbjct: 280 LAFNLVGDGLRDVLDPK 296