Pairwise Alignments

Query, 290 a.a., putative Opine ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 271 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  204 bits (519), Expect = 2e-57
 Identities = 106/261 (40%), Positives = 157/261 (60%)

Query: 27  IGIGLLVMIVLVALFAPLIAPYDPLQQNIAYRLEPPSAEFWLGTDTYGRDVLSRLIYGTR 86
           IG  +L  I L A       P+DP+    A RL  P A  WLGTD +GRDVLSRL+    
Sbjct: 10  IGGTILGAIALAAGIGLFWTPFDPVTLGYAKRLAAPDAVHWLGTDEFGRDVLSRLMTAAA 69

Query: 87  VSLLVGFVAVMIAMVVGSALGVIAGYVGGITDRLITGFVDVLLSFPTLLLGLMVAAMLGA 146
            S  +  + V  A+++G+ +GV++GY+ G TDR++  F D LL+FP +LL L   A+ GA
Sbjct: 70  TSARISVLTVATAVLLGTLVGVLSGYLRGWTDRVLMAFNDALLAFPGILLALGFLAVAGA 129

Query: 147 SLENLIIAIAITEIAPFVRIARAPTIALKQRDFVEAGRSLGYGPGRLMTVHILPNMISEV 206
           +   +++A+ I       RI R   ++L++ D++ A R +G     ++  H+LPN ++ +
Sbjct: 130 NEYGIVVALGIAYAPSVARIVRGTVMSLREMDYIAASRLMGNSEFFIVWRHVLPNCVAPL 189

Query: 207 LVLGALWMATAIRTEASLSFIGLGVPPPAPTWGSMIREGFENILDAWWLTVFPSLAILLT 266
           +VL       A+  E++LSF+GLGVPPPAPTWG+M+      I  A WL +FP   I LT
Sbjct: 190 VVLATSMFGWALLAESALSFLGLGVPPPAPTWGNMLAGSRPFIAKAVWLAIFPGACISLT 249

Query: 267 VLALSLLGDALRDANDPKTRS 287
           +L ++LLGDALRD  DP+ R+
Sbjct: 250 LLGINLLGDALRDRLDPRMRN 270