Pairwise Alignments

Query, 290 a.a., putative Opine ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 299 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  211 bits (537), Expect = 2e-59
 Identities = 112/274 (40%), Positives = 177/274 (64%), Gaps = 11/274 (4%)

Query: 22  NRLSWIGIGLLVMIVLVALFAPLIAP---YDPLQQNIAYRLEPPSAE-------FWLGTD 71
           +R++  G+ +L ++VL AL AP I P   YD LQ ++     PP +        +WLGTD
Sbjct: 23  SRIAIGGLVVLGIVVLAALLAPWITPQNPYDLLQLDVLDARLPPGSHSSEGGYTYWLGTD 82

Query: 72  TYGRDVLSRLIYGTRVSLLVGFVAVMIAMVVGSALGVIAGYVGGITDRLITGFVDVLLSF 131
             GRD+ S ++YG R+SL VG  + +IA VVG+ +G+IA Y GG  D L+   VD+LLSF
Sbjct: 83  GQGRDLYSAIVYGLRISLTVGVGSALIAAVVGTLVGLIAAYAGGKVDALLMRLVDLLLSF 142

Query: 132 PTLLLGLMVAAMLGASLENLIIAIAITEIAPFVRIARAPTIALKQRDFVEAGRSLGYGPG 191
           PT+L+ LM+ A +G  + N+++ + + E A + R AR   +   +R++V+A +  G    
Sbjct: 143 PTILMALMILAYVGKGVGNVMLTLVLLEWAYYARTARGQALVEARREYVDAAQGQGIPRW 202

Query: 192 RLMTVHILPNMISEVLVLGALWMATAIRTEASLSFIGLGVPPPAPTWGSMIREGFENIL- 250
           R++T HILPN +  +LV+GAL +A AI  EA+LSF+GLGVP   P+ G +I  G++ +L 
Sbjct: 203 RIVTGHILPNCLPPLLVIGALQIARAITLEATLSFLGLGVPITEPSLGLLISNGYQYLLS 262

Query: 251 DAWWLTVFPSLAILLTVLALSLLGDALRDANDPK 284
           + +W++ FP +A+L  ++A++L+GD LRD  +P+
Sbjct: 263 NEYWISFFPGVALLAAIVAINLVGDQLRDVLNPR 296