Pairwise Alignments

Query, 290 a.a., putative Opine ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 308 a.a., dipeptide ABC transporter - putative membrane subunit from Pseudomonas putida KT2440

 Score =  229 bits (583), Expect = 8e-65
 Identities = 119/278 (42%), Positives = 178/278 (64%), Gaps = 6/278 (2%)

Query: 16  WQALFQNRLSWIGIGLLVMIVLVALFAPLIAPYDPLQQNIAYRLEPP------SAEFWLG 69
           WQA  +N+ + +G+  + ++V  ALFAP +AP+DP +Q   + L PP      + +F LG
Sbjct: 29  WQAFARNKGAVMGLAFMCLVVFCALFAPWVAPHDPSEQYRDFLLTPPVWLEGGTWQFILG 88

Query: 70  TDTYGRDVLSRLIYGTRVSLLVGFVAVMIAMVVGSALGVIAGYVGGITDRLITGFVDVLL 129
           TD  GRD+LSRLI G R+SLL+G  +V+++++ G  LG++AG+   +    I   +DV+L
Sbjct: 89  TDELGRDLLSRLIQGARLSLLIGLSSVVMSLIPGILLGLLAGFFPQLLGPSIMRLMDVML 148

Query: 130 SFPTLLLGLMVAAMLGASLENLIIAIAITEIAPFVRIARAPTIALKQRDFVEAGRSLGYG 189
           + P+LLL + + A+LG  L N +IAIAI  +  +VR+ RA  +    RD+V A R  G G
Sbjct: 149 ALPSLLLAVAIVAILGPGLINTVIAIAIVSLPSYVRLTRAAVMGELNRDYVTAARLAGAG 208

Query: 190 PGRLMTVHILPNMISEVLVLGALWMATAIRTEASLSFIGLGVPPPAPTWGSMIREGFENI 249
             RLM V +LPN ++ ++V   L  ++AI   A+L F+GLGV PP P WG+M+    + I
Sbjct: 209 LPRLMFVTVLPNCMAPLIVQATLSFSSAILDAAALGFLGLGVQPPTPEWGTMLASARDYI 268

Query: 250 LDAWWLTVFPSLAILLTVLALSLLGDALRDANDPKTRS 287
             AWW+   P L ILL+VLA++L+GD LRDA DPK ++
Sbjct: 269 ERAWWVVSLPGLTILLSVLAINLMGDGLRDALDPKLKN 306