Pairwise Alignments

Query, 290 a.a., putative Opine ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 298 a.a., D,D-dipeptide ABC transporter permease from Escherichia coli ECRC62

 Score =  215 bits (548), Expect = 8e-61
 Identities = 108/267 (40%), Positives = 168/267 (62%)

Query: 24  LSWIGIGLLVMIVLVALFAPLIAPYDPLQQNIAYRLEPPSAEFWLGTDTYGRDVLSRLIY 83
           L+  G  ++V+++L+ +F+P +A +DP   ++  RL PPSA  W GTD  GRD+ SR++ 
Sbjct: 32  LTVTGAVIIVLMLLMMIFSPWLATHDPNAIDLTARLLPPSAAHWFGTDEVGRDLFSRVLV 91

Query: 84  GTRVSLLVGFVAVMIAMVVGSALGVIAGYVGGITDRLITGFVDVLLSFPTLLLGLMVAAM 143
           G++ S+L G V V IA ++GS LG ++G +GG  D +I   +D++LS P+L+L + +AA 
Sbjct: 92  GSQQSILAGLVVVAIAGMIGSLLGCLSGVLGGRADAIIMRIMDIMLSIPSLVLTMALAAA 151

Query: 144 LGASLENLIIAIAITEIAPFVRIARAPTIALKQRDFVEAGRSLGYGPGRLMTVHILPNMI 203
           LG SL N ++AIAI  I  +VR+AR   + ++Q  +V+A ++ G     L+  HIL N +
Sbjct: 152 LGPSLFNAMLAIAIVRIPFYVRLARGQALVVRQYTYVQAAKTFGASRWHLINWHILRNSL 211

Query: 204 SEVLVLGALWMATAIRTEASLSFIGLGVPPPAPTWGSMIREGFENILDAWWLTVFPSLAI 263
             ++V  +L + +AI   A+L FIGLG   P+  WG+M+  G   +LD WW   FP  AI
Sbjct: 212 PPLIVQASLDIGSAILMAATLGFIGLGAQQPSAEWGAMVANGRNYVLDQWWYCAFPGAAI 271

Query: 264 LLTVLALSLLGDALRDANDPKTRSERS 290
           LLT +  +L GD +RD  DPK   ++S
Sbjct: 272 LLTAVGFNLFGDGIRDLLDPKAGGKQS 298