Pairwise Alignments

Query, 290 a.a., putative Opine ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 300 a.a., dipeptide ABC transporter permease DppC from Dickeya dianthicola ME23

 Score =  230 bits (586), Expect = 3e-65
 Identities = 119/296 (40%), Positives = 184/296 (62%), Gaps = 10/296 (3%)

Query: 1   MTTLTAPLVSKPTT----LWQALFQNRLSWIGIGLLVMIVLVALFAPLIAPYDPLQQNIA 56
           +T   A    KP T     W    +N+ + +G+  +++++++A+ A ++AP+ P +Q   
Sbjct: 4   VTESAATTAPKPMTPLQEFWHYFKRNKGAVVGLAYIILMLVLAVGASVLAPHAPAEQFRD 63

Query: 57  YRLEPP------SAEFWLGTDTYGRDVLSRLIYGTRVSLLVGFVAVMIAMVVGSALGVIA 110
             L+PP      S ++ LGTD  GRDVLSRL+YG R+SLLVG + V++++V+G   G++A
Sbjct: 64  ALLKPPVWQDGGSWQYILGTDDVGRDVLSRLMYGARLSLLVGCLVVVMSLVLGVVFGLVA 123

Query: 111 GYVGGITDRLITGFVDVLLSFPTLLLGLMVAAMLGASLENLIIAIAITEIAPFVRIARAP 170
           GY GG  D  I   VD++L+ P+LLL L++ A+ G S+ N  +A+    +  +VR+ RA 
Sbjct: 124 GYFGGTVDAAIMRLVDIMLALPSLLLALVLVAIFGPSIVNASLALTFVSLPHYVRLTRAA 183

Query: 171 TIALKQRDFVEAGRSLGYGPGRLMTVHILPNMISEVLVLGALWMATAIRTEASLSFIGLG 230
            +    RD+V A R  G GP R M V+ILPN ++ ++V  ++  + AI   A+L F+G+G
Sbjct: 184 VLVEVNRDYVTASRVAGAGPLRQMFVNILPNCLAPLIVQASMGFSNAILDMAALGFLGMG 243

Query: 231 VPPPAPTWGSMIREGFENILDAWWLTVFPSLAILLTVLALSLLGDALRDANDPKTR 286
             PP P WG+M+ +  +    AWW+  FP LAILLTVLA +L+GD LRDA DPK +
Sbjct: 244 AQPPTPEWGTMLSDVLQFAQSAWWVVTFPGLAILLTVLAFNLMGDGLRDALDPKLK 299