Pairwise Alignments

Query, 290 a.a., putative Opine ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 299 a.a., ABC transporter permease subunit from Dickeya dianthicola ME23

 Score =  231 bits (589), Expect = 1e-65
 Identities = 123/271 (45%), Positives = 174/271 (64%), Gaps = 1/271 (0%)

Query: 18  ALFQNRLSWIGIGLLVMIVLVALFAPLIAPYDPLQQNIAYRLEPPSAEFWLGTDTYGRDV 77
           A  +N ++    G ++++VLVA+FAP +AP++P++ + A   E PSA  W+G D  GRDV
Sbjct: 29  AFIRNPMALASGGFVLLLVLVAVFAPWLAPWNPMEPDWAALGEAPSASHWMGADDLGRDV 88

Query: 78  LSRLIYGTRVSLLVGFVAVMIAMVVGSALGVIAGYVGGITDRLITGFVDVLLSFPTLLLG 137
           +SR+IYG R+SL +G V+V + M+ G  LG++AGY G   D LI    DVL +FP +LL 
Sbjct: 89  MSRIIYGARISLYIGVVSVTLGMLAGIVLGLLAGYYGRGIDMLIMRGCDVLFAFPGMLLA 148

Query: 138 LMVAAMLGASLENLIIAIAITEIAPFVRIARAPTIALKQRDFVEAGRSLGYGPGRLMTVH 197
           + V A+LG  L N+IIA+A+  +  F RI RA T++LKQ  +VEA R  G     ++  H
Sbjct: 149 IAVVAILGPGLNNVIIAVAVFSVPVFARIVRASTLSLKQAAYVEAVRCAGAPDRVILLRH 208

Query: 198 ILPNMISEVLVLGALWMATAIRTEASLSFIGLGVPPPAPTWGSMIREGFENIL-DAWWLT 256
           ILP  +S V+V   + + T+I T A LSFIGLG  P  P WG+++      ++   W ++
Sbjct: 209 ILPGTLSNVIVYFTMRIGTSILTAAGLSFIGLGPEPDVPEWGNILAMSRSMMMAGQWHVS 268

Query: 257 VFPSLAILLTVLALSLLGDALRDANDPKTRS 287
           VFP LAI  TVLA +LLGDALRD  DPK +S
Sbjct: 269 VFPGLAIFCTVLAFNLLGDALRDTLDPKLKS 299