Pairwise Alignments

Query, 290 a.a., putative Opine ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 295 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  224 bits (571), Expect = 2e-63
 Identities = 116/271 (42%), Positives = 165/271 (60%)

Query: 19  LFQNRLSWIGIGLLVMIVLVALFAPLIAPYDPLQQNIAYRLEPPSAEFWLGTDTYGRDVL 78
           L ++  S  G+ +L+++V+ A+FAP +A +DP  Q++A  L+ P      GTD  GRD+ 
Sbjct: 25  LLKSPTSAFGLAVLLLLVIAAIFAPWLATHDPYAQDLANTLQAPGNGHVFGTDELGRDIY 84

Query: 79  SRLIYGTRVSLLVGFVAVMIAMVVGSALGVIAGYVGGITDRLITGFVDVLLSFPTLLLGL 138
           SRL++G R++L +  +  +I   VG  +G  +GY+GG  D ++    D+ LSFP+L+L L
Sbjct: 85  SRLLWGARITLTIISLVSIIVGPVGLLVGTASGYLGGKFDTVMMRITDIFLSFPSLILSL 144

Query: 139 MVAAMLGASLENLIIAIAITEIAPFVRIARAPTIALKQRDFVEAGRSLGYGPGRLMTVHI 198
              A LG SL N IIAIA+T   P  R+ARA  +  ++ D++ A R  G  P R++   I
Sbjct: 145 AFVAALGPSLNNAIIAIALTSWPPIARLARAEAMTFRKADYIAAARLQGASPLRIIVKSI 204

Query: 199 LPNMISEVLVLGALWMATAIRTEASLSFIGLGVPPPAPTWGSMIREGFENILDAWWLTVF 258
           +P  +  VL+   L MAT I T A L F+GLG  PP P WG+MI  G   +LD+WWL  F
Sbjct: 205 MPMCLPSVLIRLTLNMATVILTAAGLGFLGLGAQPPLPEWGAMIATGRRYMLDSWWLVTF 264

Query: 259 PSLAILLTVLALSLLGDALRDANDPKTRSER 289
           P +AIL   LA +LLGD LRDA DPK  + R
Sbjct: 265 PGVAILSVSLAFNLLGDGLRDALDPKQMNRR 295