Pairwise Alignments

Query, 373 a.a., putative Group II intron-encoding maturase from Pseudomonas putida KT2440

Subject, 473 a.a., Group II intron-encoding maturase from Pseudomonas putida KT2440

 Score =  132 bits (332), Expect = 2e-35
 Identities = 99/324 (30%), Positives = 160/324 (49%), Gaps = 29/324 (8%)

Query: 3   YRATPSRRVYIPKADGRQRPLGIASLEDKIVQQAVVTVLNAIYEEDFLGFSYGFRPGRSQ 62
           Y     R V IPK  G  R LGI S+ D+++QQA+   L  I++  F  +SYGFRPGRS 
Sbjct: 109 YHPQAVRAVEIPKPQGGTRQLGIPSVVDRLIQQALQQQLTPIFDPLFSDYSYGFRPGRST 168

Query: 63  HDALDALTVALKGQKVNWILDADITSFFDEIDHEWMLMFLGHRIADRRLLGLICKWLQAG 122
           H A++     +      W ++ D+  FFD ++H+ ++  +  RI D+ +L LI ++L+AG
Sbjct: 169 HQAIEMARAHVTAGH-RWCVELDLEKFFDRVNHDILMACIERRIKDKCVLRLIRRYLEAG 227

Query: 123 VMEDGRRVVATKGTPQGAVISPLLANIYLHYVLDLWARQWRQRHARGDVIIVRYADDSVV 182
           +M  G      +GTPQG  +SPLL+NI    +LD   R+  +R  R     VRYADD+ +
Sbjct: 228 IMSGGVVSPRQEGTPQGGPLSPLLSNI----LLDELDRELERRGHR----FVRYADDANI 279

Query: 183 GFRTKVQAQQFLVQLQERLARFGLSLNASKTRLIEFGRFAARNRRKRGLGKPETFDFLGF 242
             R+    ++ LV + ER  R  L L                NR+K  + +    D+LG+
Sbjct: 280 YVRSPRAGERVLVSV-ERFLRERLKLTV--------------NRKKSQVARAWKCDYLGY 324

Query: 243 THCCSTNRSGGFQILRLTVKKRMRAMLLAMRDELKHRRHEPIWVQGQWLTRVVSGYFNYH 302
               S ++    ++ R+++  R+R  L  +   ++ R+   +  +   + R  + YF   
Sbjct: 325 G--MSWHQQPRLRVARMSL-DRLRDRLRMLLRSVRARKMATVIERINPVLRGWASYFKLS 381

Query: 303 AVPGNLTRLGGF--RSAVCRLWRQ 324
                L  L G+      C +WRQ
Sbjct: 382 QSKRPLEELDGWVRHKLRCVIWRQ 405