Pairwise Alignments

Query, 373 a.a., putative Group II intron-encoding maturase from Pseudomonas putida KT2440

Subject, 482 a.a., Retron-type reverse transcriptase from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  143 bits (361), Expect = 9e-39
 Identities = 108/326 (33%), Positives = 165/326 (50%), Gaps = 37/326 (11%)

Query: 2   RYRATPSRRVYIPKADGRQRPLGIASLEDKIVQQAVVTVLNAIYEEDFLGFSYGFRPGRS 61
           +YR    R V IPK +G  R LGI +++D++VQQA+  VL+  Y+  F   SYGFRP R 
Sbjct: 109 KYRVESVREVQIPKPNGGVRILGIPTVKDRLVQQAISQVLSLHYDPTFSDRSYGFRPDRG 168

Query: 62  QHDALDALTVALKGQKVN----WILDADITSFFDEIDHEWMLMFLGHRIADRRLLGLICK 117
            HDAL        GQ+V+    WI+D D+  FFD ++H+ ++  LG RI D+ LL LI K
Sbjct: 169 AHDALRQA-----GQEVSEGRDWIVDIDLEKFFDTVNHDRLMWLLGTRIGDKTLLKLIGK 223

Query: 118 WLQAGVMEDGRRVVATKGTPQGAVISPLLANIYLHYVLDLWARQWRQRHARGDVIIVRYA 177
           +L+AG+++DG      KG PQG+ +SPLL+NI    +LD   ++   R  R     VRYA
Sbjct: 224 FLRAGMLKDGLVSQGVKGMPQGSPLSPLLSNI----ILDELDKELEVRGHR----FVRYA 275

Query: 178 DDSVVGFRTKVQAQQFLVQLQERLARFGLSLNASKTRLIEFGRFAARNRRKRGLGKPETF 237
           DD +V  +++  A++ L               +S T  IE       N+ K  + +P   
Sbjct: 276 DDLIVMVKSEPSAKRVL---------------SSLTAFIEQRMLLKVNKSKSKISRPYEL 320

Query: 238 DFLGFTHCCSTNRSGGFQILRLTVKKRMRAMLLAMRDELKHRRHEPIWVQGQWLTRVVSG 297
           +FLG +      R G    L  T ++R++A L  +    +    E +  +   + R    
Sbjct: 321 NFLGHS-ILIEGRLG----LSKTSEQRLKAKLKQLTQRNRGISLEQLVKELNPILRGWLN 375

Query: 298 YFNYHAVPGNLTRLGGFRSAVCRLWR 323
           YF    + G L  + G+ +   R +R
Sbjct: 376 YFKNAQMIGRLKAIEGWLNRRIRCFR 401