Pairwise Alignments

Query, 373 a.a., putative Group II intron-encoding maturase from Pseudomonas putida KT2440

Subject, 449 a.a., Group II intron-encoded protein LtrA from Alteromonas macleodii MIT1002

 Score =  122 bits (305), Expect = 3e-32
 Identities = 95/349 (27%), Positives = 168/349 (48%), Gaps = 53/349 (15%)

Query: 2   RYRATPSRRVYIPKADGRQRPLGIASLEDKIVQQAVVTVLNAIYEEDFLGFSYGFRPGRS 61
           +Y+ +P +RV I K DG +R LGI ++ D+++QQA+  VL  I++  F   S+GFRP R+
Sbjct: 82  QYQPSPVKRVEIDKPDGGKRQLGIPTIVDRVIQQAIAQVLTPIFDPTFSDNSFGFRPHRN 141

Query: 62  QHDALDALTVALKGQKVNWILDADITSFFDEIDHEWMLMFLGHRIADRRLLGLICKWLQA 121
              A+  +   +K  +  + +D D++ FFD ++H+ ++ +LG+++ D+RLL LI ++L+A
Sbjct: 142 GQQAVKQVNSIIKTGR-RFAVDVDLSKFFDRVNHDLLMTYLGYKVKDKRLLKLIKRYLRA 200

Query: 122 GVM-----EDGRRVVATKGTPQGAVISPLLANIYLHYVLDLWARQWRQRHARGDVIIVRY 176
           G++     ++     + +G PQG  +SPLLANI    +LD   ++  +R         RY
Sbjct: 201 GILCKTKGDNQLYSESREGVPQGGPLSPLLANI----MLDPLDKELEKRGHE----FARY 252

Query: 177 ADDSVVGFRTKVQAQQFLVQLQERLA-RFGLSLNASKTRLIEFGRFAARNRRKRGLGKPE 235
           ADD  +  +T    ++ L  +   L  R  L +N +K+ ++                K  
Sbjct: 253 ADDFTILVKTPRSGERVLNSISRFLCHRLKLVVNTTKSHVV----------------KTS 296

Query: 236 TFDFLGFTHCCSTNRSGGFQILRLTVKKRMRAMLLAMRDELKHRRHEPIWVQGQW----L 291
              FLGFT      ++G  Q    T        L+  + +++   +    V  Q+    L
Sbjct: 297 ESKFLGFTF-----KAGRIQWYPKT--------LMKFKQQVRRLTNRNWGVSMQYQLFKL 343

Query: 292 TRVVSGYFNYHAVPGNLTRLGGF-----RSAVCRLWRQALKRRSQRNRL 335
           ++ + G+ NY  +     R         R      WRQ  K R++   L
Sbjct: 344 SQYLRGWINYFGIASGYQRCVELDHWIRRRVRMAYWRQWRKPRTKVRHL 392