Pairwise Alignments

Query, 511 a.a., transposase from Pseudomonas putida KT2440

Subject, 524 a.a., Mobile element protein from Variovorax sp. SCN45

 Score =  236 bits (603), Expect = 1e-66
 Identities = 170/515 (33%), Positives = 261/515 (50%), Gaps = 38/515 (7%)

Query: 16  RALAAQALQLQSQVEAMSRKIQNDEILIEQFKFEIALLKRHKFAKRSEQISPAQGSLLDD 75
           +ALA    + +S V  +       ++ +E+ +     L+   FA +SE    A+GS   D
Sbjct: 15  QALAEATRRSESLVGELRVVTTERDLALERLR----ALQGQLFAAKSE----ARGSEQKD 66

Query: 76  LLDTDLEAIEAELKQLLPASSQAEP--------RQSPKRAPLPPQFPRAVIRHEPENTQC 127
           L   + EA+ A   Q LPA S  E         R+   R PL P  PR ++RHE   ++ 
Sbjct: 67  LFLNEAEAL-APTAQTLPAESDDEESTTVAGHQRKKRGRKPLDPALPRDIVRHELPESER 125

Query: 128 AC---GCQLQRIGEDVSEKLDYTPGVFTVEQHVRGKWACRQCETLIQ-APVPAQVIDKGI 183
            C   G  L  IG +VSE++   P    V QH R K+AC  C+  ++ AP PA++I +G+
Sbjct: 126 VCAHDGHALVEIGAEVSEQMHVIPEQVRVLQHHRIKYACPCCDLSLKVAPTPARIIPRGL 185

Query: 184 PTAGLLAHVMVAKFADHLPLYRQEKILGRAGLAIARSTLAQWVGQTGVRLQPLVDALREA 243
            T    A V+  K+   +PLYR   +L R G  I  +TLA  V + G+ +QP+++ LR+ 
Sbjct: 186 LTEEAQAWVITGKYQFGMPLYRTAVLLRRFGGNIVSNTLAAGVVRIGLAVQPVINLLRDH 245

Query: 244 VLKQGVIHADETPVQMLA-PGEKKTHRAYVWAYSTTPFSALNAVVYDFSPSRAGEHA-RN 301
           +L   +I+ DET VQ+L  PG K   ++Y+WA      S     ++ ++P R   HA + 
Sbjct: 246 LLDSDLIYGDETTVQVLKEPGRKAQTKSYMWAQMNG--SGPPVRLFAYAPGRGAMHADKL 303

Query: 302 FLGDWSGKLVCDD----FAGYKAGFEQGITEIGCMAHARRKFFDLHVA------NKSQLA 351
           + G   G     D    + G  AG   G+T +GC  HARR F     A      +  QLA
Sbjct: 304 YAGIRRGATFVSDGYQVYDGIAAG--HGLTHLGCWVHARRPFVKAEEAIPKAARSPDQLA 361

Query: 352 EQALHSISGLYEVERQAREMSDEDRWRIRQELAVPISKTLHEWMLAQRDLVPNGSATAKA 411
            + +  I  LY  E +A + + + R R+R+  +  +   + + +L     V   S   +A
Sbjct: 362 TRFIKLIGKLYRAEARAEKWTPQRRGRLRKRYSASVVSNIEQLLLTNLHAVAPTSLLGEA 421

Query: 412 LDYSLKRWVALTRYLDDGSVPIDNNQVENQIRPWALGRSNWLFAGSLRSGKRAAAIMSLI 471
           L Y   +W  L R+L+ GS P+D+N VEN IRP+ +GR  WLFA ++     +A + SLI
Sbjct: 422 LHYLHGQWPKLIRFLESGSWPLDSNPVENAIRPFVVGRKGWLFADTVGGANASANLYSLI 481

Query: 472 QSARMNGHDPYAYLKDVLTRLP-TQRASEIGQLLP 505
           ++A+ NG +PY YL  +  +LP  Q A +   LLP
Sbjct: 482 ETAKANGIEPYRYLVALFKKLPLAQTADDYEALLP 516