Pairwise Alignments

Query, 511 a.a., transposase from Pseudomonas putida KT2440

Subject, 537 a.a., Mobile element protein from Sphingobium sp. HT1-2

 Score =  306 bits (785), Expect = 9e-88
 Identities = 190/511 (37%), Positives = 272/511 (53%), Gaps = 31/511 (6%)

Query: 24  QLQSQVEAMSRKIQNDEILIEQFKFEIALLKRHKFAKRSEQISPAQGSLLDDLLDTDLEA 83
           +L   VE +   +  +     + +  + L+ R  F KRSE++   Q +L   L D ++  
Sbjct: 19  ELPDNVEQLKAMVLAERARAARLEHILKLINRSTFGKRSEKLPVDQLALT--LEDQNVAL 76

Query: 84  IEAELKQLLPASS------QAEPRQSP--KRAPLPPQFPRAVIRHEPENTQCACGCQLQR 135
            EA+  Q   A        +   R++P  +RA LP   PR     EP+N +CACG  L +
Sbjct: 77  GEADGLQDKAAEEAGRYGLRPRRRRAPDAERASLPAHLPRFETVIEPKNLECACGGTLHK 136

Query: 136 IGEDVSEKLDYTPGVFTVEQHVRGKWACRQCETLI-QAPVPAQVIDKGIPTAGLLAHVMV 194
           IGED SE+LD  P    V   +R ++ACR C   + QA  PA V+  G+PT  L+A V++
Sbjct: 137 IGEDRSERLDIIPAQHRVMVTIRPRYACRCCSDGVRQASAPAHVVPGGLPTEALIADVLI 196

Query: 195 AKFADHLPLYRQEKILGRAGLAIARSTLAQWVGQTGVRLQPLVDALREAVLKQGVIHADE 254
            K+ DHLPLYRQ KI  R G+ I+R+T+A WVG+    L P+ D +R   L +  +  DE
Sbjct: 197 NKYCDHLPLYRQSKIFARQGIEISRATMANWVGRGIAALMPITDRMRADALARARLFVDE 256

Query: 255 TPVQMLAPGEKKTHRAYVWAY--------STTPFSALNAVVYDFSPSRAGEHARNFLGDW 306
           T V++LAPG  KT   Y+W             P  AL    Y + P R    A+  LG +
Sbjct: 257 TTVKVLAPGTGKTKTGYMWVIVCDDRAHGGVDPPLAL----YTYMPGRGKMWAKQLLGSY 312

Query: 307 SGKLVCDDFAGYKA-----GFEQGITEIGCMAHARRKFFDLHVANKSQLAEQALHSISGL 361
            G L  D +  Y       G + G+T+  C AH RR F D    + + +A+ AL  I+ +
Sbjct: 313 QGILQVDAWQAYDQFGKDDGADTGVTKSYCWAHLRRGFVD--AGSDAPVAQDALQRIAEI 370

Query: 362 YEVERQAREMSDEDRWRIRQELAVPISKTLHEWMLAQRDLVPNGSATAKALDYSLKRWVA 421
           Y +E++ R  + E+R  +RQE   P+ + LH W  A    +  GSAT+ A+ Y+LKRW  
Sbjct: 371 YGIEKEIRGRTAEERLAVRQERTRPLVEKLHAWFAATAPRMMAGSATSDAMKYALKRWAG 430

Query: 422 LTRYLDDGSVPIDNNQVENQIRPWALGRSNWLFAGSLRSGKRAAAIMSLIQSARMNGHDP 481
            TR+LDDG + IDNN  E  IRP  L R N LF G     +  AAI SL+++ +M   +P
Sbjct: 431 FTRFLDDGRIEIDNNTAERAIRPVTLQRKNALFTGHQLGAENWAAISSLVETCKMLDINP 490

Query: 482 YAYLKDVLTRLPTQRASE-IGQLLPHQWVSA 511
           YAYL DVLTR+ T+  ++ I  LLP+ W  A
Sbjct: 491 YAYLCDVLTRIITRADTDPIDDLLPYCWTDA 521