Pairwise Alignments

Query, 511 a.a., transposase from Pseudomonas putida KT2440

Subject, 510 a.a., transposase from Pseudomonas putida KT2440

 Score =  313 bits (801), Expect = 1e-89
 Identities = 179/483 (37%), Positives = 278/483 (57%), Gaps = 11/483 (2%)

Query: 25  LQSQVEAMSRKIQNDEILIEQFKFEIALLKRHKFAKRSEQISPAQGSLLDDLLDTDLEAI 84
           L+  +E M  +  +D+  I   + E+ALL++  F +++EQ   A    L   L  + E++
Sbjct: 15  LKQLLEQMIHERASDKSKIVHLEEEVALLRQRLFGRKTEQTGDAATPQLP--LFDEAESL 72

Query: 85  EAELKQLLPASSQAEPRQSPKRAPLPPQFPRAVIRHE-PENT-QCACGCQLQRIGEDVSE 142
              L +       A  ++  KR PLP   PR  + HE PE+   CACGC+   IGE+VSE
Sbjct: 73  AEPLDEADDEEVVAPTKRRGKRKPLPADLPRIEVVHELPEHELTCACGCRKHAIGEEVSE 132

Query: 143 KLDYTPGVFTVEQHVRGKWACRQCETL-IQAPVPAQVIDKGIPTAGLLAHVMVAKFADHL 201
           +L+  P    V +HVR  + CR CE+  + A  PAQ+I+K + +  +LA ++  K+ D L
Sbjct: 133 QLEIVPMQIRVIKHVRKVYGCRDCESAPVTADKPAQMIEKSMASPSVLAMLLTTKYVDGL 192

Query: 202 PLYRQEKILGRAGLAIARSTLAQWVGQTGVRLQPLVDALREAVLKQGVIHADETPVQMLA 261
           PL+R EK+LGR G+ I R TLA+WV Q     QPL++ +RE++LK  +IH DET VQ+L 
Sbjct: 193 PLHRFEKVLGRHGIDIPRQTLARWVIQCSEHFQPLLNLMRESLLKSRIIHCDETRVQVLK 252

Query: 262 -PGEKKTHRAYVWAYSTTPFSALNAVVYDFSPSRAGEHARNFLGDWSGKLVCDDFAGYKA 320
            PG + + ++++W  +  P      +++D++ SRA E     L  + G ++ DD+AGY A
Sbjct: 253 EPGREPSSQSWMWVQTGGPPDR-PVILFDYATSRAQEVPVRLLDGYRGYVMTDDYAGYNA 311

Query: 321 -GFEQGITEIGCMAHARRKFFD---LHVANKSQLAEQALHSISGLYEVERQAREMSDEDR 376
              + G+  +GC AHARRKF +   +    K+  A+ AL+ I+ LY VER  ++  DEDR
Sbjct: 312 LAAQDGLERLGCWAHARRKFVEAQKVQPKGKTGRADIALNLINKLYGVERDLKDSDDEDR 371

Query: 377 WRIRQELAVPISKTLHEWMLAQRDLVPNGSATAKALDYSLKRWVALTRYLDDGSVPIDNN 436
              R E ++P+   L  W+   +  V   +A  KA+ Y    W  L RY++ G +P+DNN
Sbjct: 372 KVARMERSLPLLTQLKNWVEKTQPQVTTQNALGKAIGYLASNWSKLERYVEHGYLPMDNN 431

Query: 437 QVENQIRPWALGRSNWLFAGSLRSGKRAAAIMSLIQSARMNGHDPYAYLKDVLTRLPTQR 496
             E  IRP+ +GR NWLF+ + R    +A + SL+++A+ NG +PYA+L+  L RLP   
Sbjct: 432 AAERAIRPFVIGRKNWLFSDTPRGATASAQLYSLVETAKANGQEPYAWLRHALERLPQAA 491

Query: 497 ASE 499
           + E
Sbjct: 492 SVE 494