Pairwise Alignments

Query, 511 a.a., transposase from Pseudomonas putida KT2440

Subject, 515 a.a., IS66 family transposase from Magnetospirillum magneticum AMB-1

 Score =  374 bits (959), Expect = e-108
 Identities = 211/509 (41%), Positives = 293/509 (57%), Gaps = 20/509 (3%)

Query: 12  PEQLRALAAQALQLQSQVEAMSRKIQNDEILIEQFKFEIALLKRHKFAKRSEQISPAQGS 71
           P  + AL A        + A    + +  + +E+ + E+A L+R +F + SE+IS A   
Sbjct: 7   PTDIVALQAIIATQADALAAAQAGLMSKTLEVEKLRIELARLRRMQFGRSSEKISRAA-- 64

Query: 72  LLDDLLDTDLEAIEAELKQLLP-----ASSQAEPRQSPKRAPLPPQFPRAVIRHEPENTQ 126
              D L+  LE +E+     L      AS    P+++  R PLPP  PR  + H+   T 
Sbjct: 65  ---DQLELMLEEVESSAAAALAPAEDGASDGPAPKRNRARRPLPPHLPRTEVVHDSACTC 121

Query: 127 CACGCQLQRIGEDVSEKLDYTPGVFTVEQHVRGKWACRQCETLIQAPVPAQVIDKGIPTA 186
            +CG  ++++GEDV+E LDY PG F V +H+R  ++CR CE ++QAP+P+  I++G+P+A
Sbjct: 122 PSCGGAMRKVGEDVTEILDYVPGRFQVIRHIRPAYSCRACEGMVQAPMPSMPIERGLPSA 181

Query: 187 GLLAHVMVAKFADHLPLYRQEKILGRAGLAIARSTLAQWVGQTGVRLQPLVDALREAVLK 246
            LLAHV+V+K+ DHLPLYRQ  I  R G+ + R  LA+WVG+    ++PLVDA     + 
Sbjct: 182 ALLAHVLVSKYCDHLPLYRQSGIYARDGVDLDRGLLAEWVGKAATLVRPLVDAAEAHAMA 241

Query: 247 QGVIHADETPVQMLAPGEKKTHRAYVWAY--STTPFS--ALNAVVYDFSPSRAGEHARNF 302
            G IH D+TPV +LAPG  KT    +WAY     P+   A  AV Y +SP R GE  +  
Sbjct: 242 GGQIHGDDTPVPVLAPGIGKTKTGRLWAYLRDERPWDGPAPPAVAYRYSPDRKGERPQKH 301

Query: 303 LGDWSGKLVCDDFAGY------KAGFEQGITEIGCMAHARRKFFDLHVANKSQLAEQALH 356
           L  + G L  D +AG+      K G    +TE+ C AH RRKF D+HVA  + +A +AL 
Sbjct: 302 LAGFRGHLHADGYAGFGELYLAKEGKPPPVTEVACWAHVRRKFHDVHVATTAPIAAEALE 361

Query: 357 SISGLYEVERQAREMSDEDRWRIRQELAVPISKTLHEWMLAQRDLVPNGSATAKALDYSL 416
            I  L+ VER    +  + R  IRQ  A PI   L  ++ A    +   S  A A+ Y+ 
Sbjct: 362 RIGRLFAVERAIVGIPPDQRRAIRQVEACPIMGDLAGYLDASLTRISGKSELAAAIRYAR 421

Query: 417 KRWVALTRYLDDGSVPIDNNQVENQIRPWALGRSNWLFAGSLRSGKRAAAIMSLIQSARM 476
            RW ALTRYLDDG + I NN  E  +RP ALGR NWLFAGS   G RAAAI +L ++A++
Sbjct: 422 SRWSALTRYLDDGHLEISNNAAERAMRPLALGRKNWLFAGSDAGGDRAAAIYTLTETAKL 481

Query: 477 NGHDPYAYLKDVLTRLPTQRASEIGQLLP 505
           NG DP AYL+DVLTR+     + I  LLP
Sbjct: 482 NGLDPEAYLRDVLTRIADHPVNRIADLLP 510