Pairwise Alignments

Query, 432 a.a., D-amino acid dehydrogenase 1 small subunit from Pseudomonas putida KT2440

Subject, 369 a.a., D-amino acid oxidase from Pseudomonas simiae WCS417

 Score =  110 bits (274), Expect = 9e-29
 Identities = 109/407 (26%), Positives = 165/407 (40%), Gaps = 59/407 (14%)

Query: 2   RVLILGSGVVGTVSAYYLAREGFEVVVVDRQDGPAMETSFANAGQVSPGYASPWSAPGVP 61
           +V+I+G GV+G ++A+ LA +G  VV+++R  G   E+S+A  G VSP Y  PW      
Sbjct: 6   QVVIVGGGVIGLLTAFNLATQGQAVVLLERA-GLGQESSWAGGGIVSPLY--PWRYSPAV 62

Query: 62  LKAIRWMLQQHAPLAIKPTSSLDQYRWMIQMLRNCNPASYAVNKERMVRISEYSRDCLDE 121
                W              S D Y  + Q                              
Sbjct: 63  TALAHW--------------SQDFYPQLAQ-----------------------------R 79

Query: 122 LRAETGISYEARQLGTTQLFRTQAQVDNAAKDIAILKQSGVPFELLDRDGIAKAEPALAS 181
           L A+TG+  E    G   L      +D+ A+ +A   + G P   +D      A P L  
Sbjct: 80  LFAQTGVDPEVHTTGLYWL-----DLDDEAEALAWAAREGRPLSKVDVSAAHDAVPVLGG 134

Query: 182 VRDKLAGALRLPNDQTGDCQMFTRKL-AKMAEELGVEFRFGCNIDRLECSGDTISGVWID 240
                A A+ + N          + L A +    GV     C +         + GV   
Sbjct: 135 ---GYANAIYMANVANVRNPRLVKSLKAALLTLPGVTIHEQCEVTGFLLDAGNVVGVSTA 191

Query: 241 GKLEVADQYVLALGSYSPHMLKPLGIQAPIYPLKGYSLTIPITDASMAPSSTILDETYKV 300
                 DQ VLA G++S  +L  LG+  P+ P+KG  +      AS   SS +L +  + 
Sbjct: 192 DGAIFGDQVVLAAGAWSGELLGTLGLSLPVEPVKGQMILYKC--ASDFLSSMVLAKG-RY 248

Query: 301 AITRFDDRIRVGGMAEIAGFDLSLNARRRDTLELVVGDLYPKGGDLTKATFWTGLRPATP 360
           AI R D  I +G   E  GFD +      ++L+    +L P   D      W GLRP +P
Sbjct: 249 AIPRRDGHILIGSTLEHEGFDKTPTETALESLKASAVELIPALADAEVVGHWAGLRPGSP 308

Query: 361 DGTPIVGKTK-YRNLFLNTGHGTLGWTMSCGSGRLLADLMAGKKPKI 406
           +G P +G+   ++ L+LN GH   G  ++  S +L  DL+  + P I
Sbjct: 309 EGIPYIGQVPGFKGLWLNCGHYRNGLVLAPASCQLFTDLLLERAPII 355