Pairwise Alignments

Query, 466 a.a., Transcriptional regulator, GntR family from Pseudomonas putida KT2440

Subject, 496 a.a., putative regulator from Pseudomonas putida KT2440

 Score =  118 bits (296), Expect = 4e-31
 Identities = 117/441 (26%), Positives = 190/441 (43%), Gaps = 41/441 (9%)

Query: 19  YKILVQAISSDIEQHKLADDQRLPPQRQVADALGISVQTVTNAYKELERQGLVRCEVGRG 78
           Y  L + + + I+Q      QRLP  R +++  G+S+ TV  AY+ LE  G+V      G
Sbjct: 24  YLNLAEILGARIKQGLYRPGQRLPSVRALSEEHGVSLSTVQQAYRMLEDSGMVSPRPKSG 83

Query: 79  SFVSRRMSDRVASYILDAPERALVDLS-----TARIIHTPEHDRYWRETCAELAN---EV 130
            FVS +     A   +  P +  VD+S        +  TP      R+   +L     ++
Sbjct: 84  YFVSDQ-RQLPALPAVSRPAQRPVDISQWEQVLELVRSTP------RQDVVQLGRGMPDI 136

Query: 131 DQSWIR-LCRPVAGFDAHRD-------------AACHWLGRLGLPG---LAREDVLITNG 173
           D   ++ L R +A     +D             A    + RL L     L   D++IT G
Sbjct: 137 DSPTLKPLLRSLAQLSRRQDMPGLYYDNIHGNLALREQVARLMLDSGCRLGPADLVITTG 196

Query: 174 AAHGLFLALASLAGPDDLVLCEGMTDHGVIGNSQVLGFNLKGLDTDR-DGIDPEHFEDIC 232
               L  ++ ++  P D+V  +  + HG +   + LG     + TD   GI  E  E   
Sbjct: 197 CHEALSCSIRAVCEPGDIVAVDSPSFHGAMQTLKGLGMKALEIPTDPVTGISLEALELAL 256

Query: 233 SNERVTALVCTPNLNNPTSALMPNSRRKEIASIARRFGVHIIEDDVYGPLLNQYEGP-PI 291
               +  +  TP+ NNP   +MP +R+K + S+A+R+ V I+EDDVYG L   Y  P  +
Sbjct: 257 EQWPIKLIQITPSCNNPLGYIMPEARKKALLSLAQRYDVAILEDDVYGDLAYTYPRPRTL 316

Query: 292 SSYAPE-LSFYCTSMTKSVLTGLRIGFLKVPKRLALRTESILRVTSWMAAPMLAEVAARW 350
            S+  +     C+S +K++  GLRIG++  P R   R   +  +++   A       A +
Sbjct: 317 KSFDDDGRVLLCSSFSKTLAPGLRIGWV-APGRYLERVLHMKYISTGSTASQPQLAIADF 375

Query: 351 IMDGRADTLIQLQRRLLETRQKLVADEMGRYL----YCHRPH-SLNAWLNVPAHWDVSSL 405
           I  G     ++  R   +  + L+ D + RY        RP      W+ +P H D   L
Sbjct: 376 IAAGHYQPHVRRMRSQYQRGRDLMGDWVTRYFPAGTRVSRPQGGFMLWVELPEHLDTLRL 435

Query: 406 VRTLRQQHIAVTSPEPFTVRG 426
            R L +Q + V     F+  G
Sbjct: 436 NRALLEQGVQVAVGSIFSASG 456