Pairwise Alignments

Query, 284 a.a., Amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

Subject, 246 a.a., arginine ABC transporter substrate-binding protein from Dickeya dianthicola ME23

 Score = 70.9 bits (172), Expect = 3e-17
 Identities = 63/242 (26%), Positives = 112/242 (46%), Gaps = 20/242 (8%)

Query: 12  QRLTLACAIASIAVSAHAATTLDSLKEQGSVRIGYANETPFAYTGTDGKVTGESPEIATA 71
           ++L LA  +AS  ++ +A T  D+++   S     A   PF       ++ G   ++A A
Sbjct: 2   KKLILAALLASATMTFNA-TAADTIRFAAS-----ATYPPFESLDAGNQIVGFDIDLANA 55

Query: 72  IFKQLGIKDVNGVLTEWGSLIPGLRAGRFDAIAAGMYITPARCKQVLFTDPHYQLPDALL 131
           + KQL     +     + SLIP L+  R+DA+ +GM ITP R KQV FT P+Y     ++
Sbjct: 56  LCKQLQAT-CSFTNQAFDSLIPALKFRRYDAVISGMDITPERSKQVAFTQPYYANSAIVI 114

Query: 132 VPKGNPKELFSYEDVAKNPEVKLAIMAGTVELQYARDSGVKDEQILQVPDTTAQLQAVRA 191
             KG       +  +A     ++ +  GT   ++ +D+     ++  VP  + Q   +  
Sbjct: 115 AQKG------KFHSLADLKGKRIGMENGTTHQKFLQDT---HPEVKTVPYDSYQNALIDL 165

Query: 192 K--RADAAVGTQLTMKGLAAKGGDSVEAMTDFKDDPSHIGYG-ALAFRPEDKELRDQVNA 248
           K  R D   G    +     K    +  + +   DP++ G G  +A RP+++ L +++N 
Sbjct: 166 KNGRLDGVFGDTAVVNEW-LKTNPDLATVGEKVTDPAYFGIGLGIAVRPDNQPLLEKLNG 224

Query: 249 QL 250
            L
Sbjct: 225 AL 226