Pairwise Alignments

Query, 284 a.a., Amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

Subject, 269 a.a., ABC transporter substrate binding protein (amino acid) from Agrobacterium fabrum C58

 Score = 68.2 bits (165), Expect = 2e-16
 Identities = 66/227 (29%), Positives = 106/227 (46%), Gaps = 20/227 (8%)

Query: 7   LSAVAQRLTLACAIASIAVSAHAATTLDSLKEQGSVRIGYANE-TPFAYTGTDGKVTGES 65
           L  +   L +   IA+ A +A    T   L E+G++  G A    PF +   D ++TG  
Sbjct: 2   LKTILAALIVPLGIAASASAAELPGT--GLVEKGALTYGVAATFAPFEFQKGD-QLTGFD 58

Query: 66  PEIATAIFKQLGIKDVNGVLTEWGSLIPGLRAGRFDAIAAGMYITPARCKQVLFTDPHYQ 125
            ++ +A+ K+L   +   +  E+  LIP L  GR D I + MYI PAR +QV F  P+ +
Sbjct: 59  IDLISALSKKLKA-EAKPMNMEFKGLIPALIGGRIDLINSAMYINPARSEQVDFI-PYLK 116

Query: 126 LPDALLVPKGNPKELFSYEDVAKNPEVKLAIMAGTVELQYARD------SGVKDEQILQV 179
           + + +LV  GNPK++   +D      V +  + G  E Q   D       G++  ++L  
Sbjct: 117 IGNMVLVQAGNPKKITGRDDSLCGKTVSVT-LGGIQESQARADDTRCKAKGLEGVKVLTF 175

Query: 180 PDTTAQLQAVRAKRADA-------AVGTQLTMKGLAAKGGDSVEAMT 219
           P        +R  RADA       AV  Q ++ G+    G+  E+ T
Sbjct: 176 PTAQDSALTLRQGRADATFDSTPGAVVLQSSVPGVYETVGEEFESNT 222