Pairwise Alignments

Query, 284 a.a., Amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

Subject, 311 a.a., ABC transporter substrate binding protein (amino acid) from Agrobacterium fabrum C58

 Score = 64.7 bits (156), Expect = 2e-15
 Identities = 65/262 (24%), Positives = 113/262 (43%), Gaps = 14/262 (5%)

Query: 5   TSLSAVAQRLTLA-----CAIASIAVSAHAATTLDS-LKEQGSVRIGYANETPFAYTGTD 58
           T+ +A  + +T+A       +  +A +   A  L S +K++  V++      P ++    
Sbjct: 23  TTQAAEGKPVTIAPEADIAKLPGVAFNQDLADRLPSAIKDKKVVKVATDLTPPISFQDEA 82

Query: 59  GKVTGESPEIATAIFKQLGIKDVNGVLTEWGSLIPGLRAGRFDAIAAGMYITPARCKQVL 118
           GK+ G   ++A A+   LG+      +    +++P + + RFD   +G+       KQV 
Sbjct: 83  GKLIGIDADLAAALGVILGVDVQMTNVGAGAAIVPAVLSKRFDMTLSGINDDVELEKQVD 142

Query: 119 FTDPHYQLPDALLVPKGNPKELFSYEDVAKNPEVKLAIMAGTVELQYARDSGVKDE---- 174
             D  Y     + + KGNP  + S ED+      K+A+  GT + +    +  K +    
Sbjct: 143 VIDYMYDATTIMTI-KGNPLSIKSMEDLCGK---KVAVPVGTFQNRLVVAASAKCKTTPI 198

Query: 175 QILQVPDTTAQLQAVRAKRADAAVGTQLTMKGLAAKGGDSVEAMTDFKDDPSHIGYGALA 234
           +I+ +P     LQAVR  RADA V    T      K       +    D    +GY  + 
Sbjct: 199 EIISIPKMPDVLQAVRTGRADATVNGYATSVYTTEKQTGKGVGLQALPDVRLTVGYLGML 258

Query: 235 FRPEDKELRDQVNAQLKKWLGS 256
              ++ ELRD V A L+  + S
Sbjct: 259 VSKDNPELRDAVIASLQHMVDS 280