Pairwise Alignments

Query, 284 a.a., Amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

Subject, 256 a.a., ABC transporter, substrate binding protein (amino acid) from Agrobacterium fabrum C58

 Score = 68.9 bits (167), Expect = 1e-16
 Identities = 65/231 (28%), Positives = 99/231 (42%), Gaps = 14/231 (6%)

Query: 27  AHAATTLDSLKEQGSVRIGYANET--PFAYTGTDGKVTGESPEIATAIFKQLGIKDVNGV 84
           A  A  + +      VR G  NE+  PF      GK  G   ++  A+  ++  K  + V
Sbjct: 9   AGTAFAVSAFTASADVRFGIMNESYPPFFAKDASGKWQGWEIDLMDAVCAEMKEK-CSIV 67

Query: 85  LTEWGSLIPGLRAGRFDAIAAGMYITPARCKQVLFTDPHYQLPDALLVPKGNPKELFSYE 144
              W  LIP L+  +FD I + M  T  R K + FT+ +Y  P  L+  KG  K   + E
Sbjct: 68  ELSWDGLIPALQTKKFDVIWSSMSNTQEREKVIDFTNKYYNTPSKLIGAKGE-KPGAAPE 126

Query: 145 DVAKNPEVKLAIMAGTVELQYARD--SGVKDEQILQVPDTTAQLQAVRAKRADAAVGTQL 202
           DV       + I   T++ +Y +   + V DE+  Q  D     Q + A R D   G  L
Sbjct: 127 DVKGK---TIGIQVATIQSEYYKKYFAAVADEKTYQTLDEA--FQDLAAGRIDYVFGDSL 181

Query: 203 TMKGLAAK--GGDSVEAMTDFKDDPSHIGYGAL-AFRPEDKELRDQVNAQL 250
            +        G D    M +  DD   +G G     R +D EL++++NA +
Sbjct: 182 VLDAFVKSDAGKDCCADMGNVADDKEIMGLGVSGGLRKDDTELKNKLNAAI 232