Pairwise Alignments

Query, 284 a.a., Amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

Subject, 257 a.a., ABC transporter, substrate binding protein (amino acid) from Agrobacterium fabrum C58

 Score = 83.2 bits (204), Expect = 5e-21
 Identities = 72/244 (29%), Positives = 111/244 (45%), Gaps = 16/244 (6%)

Query: 10  VAQRLTLACAIASIAVSAHAATTLDSLKEQGSVRIGYANE-TPFAYTGTDGKVTGESPEI 68
           ++ RL  A +IA+I++ + AA   D +       IG      PF     DG +TG   +I
Sbjct: 3   ISTRLLAAVSIAAISLLSGAALAQDKIV------IGTEGAYPPFNNLEADGTLTGFDIDI 56

Query: 69  ATAIFKQLGIKDVNGVLTEWGSLIPGLRAGRFDAIAAGMYITPARCKQVLFTDPHYQLPD 128
           A A+ +Q+   +   V  +W  +IP L+A +FDAI A M ITP R ++V F+  +Y  P 
Sbjct: 57  AKALCEQMKA-ECTFVTNDWDGIIPALQAKKFDAIIASMSITPERLQKVDFSKKYYNTPP 115

Query: 129 ALLVPKGNPKELFSYEDVAKNPEVKLAIMAGTVELQYARDSGVKDEQILQVPDTTAQLQA 188
           A+ VPK +P  + S +D+       L     T    YA +    D  +   P        
Sbjct: 116 AIAVPKDSP--IKSIDDLKGK---SLGAQGSTTHSNYA-EKHFPDADVKMYPTADEYKLD 169

Query: 189 VRAKRADAAVGTQLTM-KGLAAKGGDSVEAMTDFKDDPSHIGYGA-LAFRPEDKELRDQV 246
           +   R DA +   + + + L    G   + +T  K DP   G GA +A R  D  L D+ 
Sbjct: 170 IANGRIDAVIDDIVVLSEWLKTDAGKCCKILTPLKVDPEINGNGAGIAVRKGDTALADKF 229

Query: 247 NAQL 250
            A +
Sbjct: 230 TAAI 233