Pairwise Alignments

Query, 460 a.a., putative Gamma-aminobutyrate transporter from Pseudomonas putida KT2440

Subject, 472 a.a., L-alanine and D-alanine permease (from data) from Pseudomonas simiae WCS417

 Score =  309 bits (791), Expect = 1e-88
 Identities = 169/447 (37%), Positives = 255/447 (57%), Gaps = 2/447 (0%)

Query: 2   QSHGLKQSLKQRHITMIALGGVIGAGLFMGSGSLIASAGPAAILSYFIGGLVVTLVMFML 61
           Q   LK+ L +RHI ++ALG  IG GLF+GS   I  AGPA +LSY IGGL + ++M  L
Sbjct: 14  QGGPLKRELGERHIRLMALGACIGVGLFLGSAKAIEMAGPAIMLSYIIGGLAILVIMRAL 73

Query: 62  GEMACRNPDAGSFSTYANTYLGDWAGFAVGWLYWFKSMMTITLEAVLLGAILHDFLPWLP 121
           GEMA  NP AGSFS YA  YLG  AGF  GW YWF  ++T   E   +   +  + P  P
Sbjct: 74  GEMAVHNPVAGSFSRYAQDYLGPLAGFLTGWNYWFLWLVTCVAEITAVAVYMGVWFPDTP 133

Query: 122 IWAGAFLMLVTLMASNAYSVRSFAEVEYWLAAMKVATILIFMLLGVSIL-LGLHSDIPAP 180
            W  A   L+++ + N  +V++F E E+W A +K+ TI+  ++ GV I+  G  +D  A 
Sbjct: 134 RWIWALAALISMGSINLIAVKAFGEFEFWFALIKIVTIIAMVIGGVGIIAFGFGNDGVAL 193

Query: 181 GLINLTAHDGFMPNGLSPVMAGVIVVIFSLGGSEIAAVAAGESENPRQNVIRAIKSVILR 240
           G+ NL AH GFMPNG+  V+  + +V+F+  G E+  + AGE++NP++ +  AI SV  R
Sbjct: 194 GISNLWAHGGFMPNGVQGVLMSLQMVMFAYLGVEMIGLTAGEAKNPQKTIPSAIGSVFWR 253

Query: 241 VMLFYVGSVSILILCLPWTDKANLASPYVSLFSLAGFGGAAVAMKLVLFVSFMSVMNSFM 300
           ++LFYVG++ +++   PW +     SP+V  F   G   AA  +  V+  + +S  N  +
Sbjct: 254 ILLFYVGALFVILSIYPWNEIGTQGSPFVMTFERLGIKTAAGIINFVVITAALSSCNGGI 313

Query: 301 FSNSRMLFSLSQRGHAPKLFSRTSAKGVPINALLLSLSICTMILTVHFVSGGDLFMTLAK 360
           FS  RML+SL+Q G AP  F++TS+ GVP  ALLLS+    + + ++++    +F+ +  
Sbjct: 314 FSTGRMLYSLAQNGQAPATFAKTSSNGVPRKALLLSIFALLLGVLLNYLVPEKVFVWVTS 373

Query: 361 STGSLVMVVWIFIIIAHVAMRIKTRHEAVAPNAFRAWLFPYTNIIALFALLAVIGTQAFD 420
                 +  W+ I++A +  R        A   +R WL+P ++ +AL  LL V+G  A+ 
Sbjct: 374 IATFGAIWTWLMILLAQLKFRKSLSPAEQAGLKYRMWLYPVSSYLALAFLLLVVGLMAYF 433

Query: 421 PASRFQFWF-TVLTVLLVVAGYFLMRQ 446
           P +R   +   V  VLL V  Y    Q
Sbjct: 434 PDTRIALYVGPVFLVLLTVLFYVFKLQ 460