Pairwise Alignments

Query, 460 a.a., putative Gamma-aminobutyrate transporter from Pseudomonas putida KT2440

Subject, 468 a.a., Amino-acid permease RocE from Pseudomonas putida KT2440

 Score =  298 bits (762), Expect = 3e-85
 Identities = 165/448 (36%), Positives = 260/448 (58%), Gaps = 7/448 (1%)

Query: 6   LKQSLKQRHITMIALGGVIGAGLFMGSGSLIASAGPA-AILSYFIGGLVVTLVMFMLGEM 64
           L ++LK RHI M++LGGVIG GLFMGSG  I   GP  AIL+Y + GL++ LVM  LGE+
Sbjct: 10  LTRALKSRHIFMLSLGGVIGTGLFMGSGVTINQGGPVGAILAYLVAGLLMYLVMVCLGEL 69

Query: 65  ACRNPDAGSFSTYANTYLGDWAGFAVGWLYWFKSMMTITLEAVLLGAILHDFLPWLPIWA 124
           + + P +GSF  +A  Y+G   GF +GW+YW     T+ LE    G ++  + P +PIW 
Sbjct: 70  SVQMPVSGSFQAHATKYIGPATGFMIGWVYWMSWATTVGLEFTAAGMLMTRWFPEVPIWY 129

Query: 125 GAFLMLVTLMASNAYSVRSFAEVEYWLAAMKVATILIFMLLGVSILLG---LHSDIPAPG 181
            + L +V L   NA + R+F E EYW + +KVATIL F+++G+ ++ G   L S  PAP 
Sbjct: 130 WSALFVVVLFGLNALATRAFGEAEYWFSGIKVATILGFIVIGLLVIFGAIPLSSGAPAPM 189

Query: 182 LINLTAHDGFMPNGLSPVMAGVIVVIFSLGGSEIAAVAAGESENPRQNVIRAIKSVILRV 241
           L NL     F P+GLS V A ++ V+++  G EI  VAAGE+E+P +++ RA+++V+ RV
Sbjct: 190 LNNLVGESLF-PHGLSAVFAVMMTVVYAFQGCEIMGVAAGETEHPEKSIPRAVRNVVFRV 248

Query: 242 MLFYVGSVSILILCLPWTDKANLASPYVSLFSLAGFGGAAVAMKLVLFVSFMSVMNSFMF 301
           ++FYV ++++L   +P      + SP+V +F + G   AA  M  V+  + +SV NS ++
Sbjct: 249 LIFYVLAIAVLSAIVPHEQAGLMESPFVQVFDMVGIPYAADLMNFVILTAILSVGNSGLY 308

Query: 302 SNSRMLFSLSQRGHAPKLFSRTSAKGVPINALLLSLSICTMILTVHFVSGGDLFMTLAKS 361
           +++R+L+++S+ G APK  S  S +GVP+ AL ++L    + L   FV+   LFM L   
Sbjct: 309 ASTRILWAMSKTGMAPKSLSPLSKRGVPLRALSITLCFALISLMTSFVAADTLFMVLMAV 368

Query: 362 TGSLVMVVWIFIIIAHVAMRIKTRHEA--VAPNAFRAWLFPYTNIIALFALLAVIGTQAF 419
           +G    V WI I +A    R     +   +    ++A L+P   ++ +    ++    A 
Sbjct: 369 SGMSGTVTWIVIALAQYRFRKAWLRDGGQLQDLKYKAPLYPLVPLLCITLCSSLFVFLAL 428

Query: 420 DPASRFQFWFTVLTVLLVVAGYFLMRQR 447
           D   R   ++    + L  A YF + +R
Sbjct: 429 DETQRPSLYWGFGFIALCYAAYFFVNRR 456