Pairwise Alignments

Query, 460 a.a., putative Gamma-aminobutyrate transporter from Pseudomonas putida KT2440

Subject, 463 a.a., gamma-aminobutyrate permease from Pseudomonas putida KT2440

 Score =  320 bits (820), Expect = 6e-92
 Identities = 172/457 (37%), Positives = 271/457 (59%), Gaps = 5/457 (1%)

Query: 1   MQSH--GLKQSLKQRHITMIALGGVIGAGLFMGSGSLIASAGPAAILSYFIGGLVVTLVM 58
           MQ+H   L   LK RH+TM+++ GVIGAGLF+GSG  IA AGPA IL+Y + G +V LVM
Sbjct: 1   MQTHKNNLSHGLKSRHVTMLSIAGVIGAGLFVGSGRAIAEAGPATILAYILAGGLVVLVM 60

Query: 59  FMLGEMACRNPDAGSFSTYANTYLGDWAGFAVGWLYWFKSMMTITLEAVLLGAILHDFLP 118
            ML EMA  +PD GSFSTYA+  +G WAG+ +GWLYW+  ++ I +EA +   I++ ++P
Sbjct: 61  RMLAEMAVASPDTGSFSTYADLAIGKWAGYTIGWLYWWFWVLIIPIEANIAATIINSWVP 120

Query: 119 WLPIWAGAFLMLVTLMASNAYSVRSFAEVEYWLAAMKVATILIFMLLGVSILLGLHSDIP 178
            L IW  + ++ + L A+N +SV+++ E E+WLA +KV  I+ F+ LGV  + GL     
Sbjct: 121 QLEIWVLSLVITLLLTATNLFSVKNYGEFEFWLALVKVVAIVSFIALGVCAIFGLLPGAG 180

Query: 179 APGLINLTAHDGFMPNGLSPVMAGVIVVIFSLGGSEIAAVAAGESENPRQNVIRAIKSVI 238
             G+  L    GFMPNG   V++ +++ +FS  G+E+  +AA ES+   +++ +A  SVI
Sbjct: 181 VSGVSRLWDTGGFMPNGFGAVLSAMLITMFSFLGAEVVTIAAAESDEAGKHISKATNSVI 240

Query: 239 LRVMLFYVGSVSILILCLPWTD-KANLASPYVSLFSLAGFGGAAVAMKLVLFVSFMSVMN 297
            R+ LFY+ S+ I+I  +PWTD +      YV++    G   A   +  V+  S  S +N
Sbjct: 241 WRITLFYILSIFIVIALVPWTDPRLATEGSYVTVLDTLGVPNAKAIIDFVVLTSVTSCLN 300

Query: 298 SFMFSNSRMLFSLSQRGHAPKLFSRTSAKGVPINALLLSLSICTMILTVHFVSGGDLFMT 357
           S +++ SRM++SLS+RG AP     TS  G P+ A+LLS     + +  +++    +F  
Sbjct: 301 SSLYTASRMVYSLSRRGDAPACAQITSRSGTPVVAVLLSTGAAFLAVIANYLVPAKVFGF 360

Query: 358 LAKSTGSLVMVVWIFIIIAHVAMRIKTRHEAVAPNAFRAWLFPYTNIIALFALLAVIGTQ 417
           L  S+G++ ++V++ I I+ + +R +   +      +R WLFP+     +  +  V+   
Sbjct: 361 LMASSGAIALLVYLVIAISQLRLRQRLTAQG-KTLGYRMWLFPWLTWGVILFISGVLVLM 419

Query: 418 AFDPASRFQFWFT-VLTVLLVVAGYFLMRQRLASSAV 453
            F P  R +   T VL VL+V +G  + R+R    AV
Sbjct: 420 LFRPDHRLEVVSTMVLAVLVVCSGVLVTRRRARGGAV 456