Pairwise Alignments

Query, 339 a.a., branched-chain alpha-keto acid dehydrogenase complex, beta subunit from Pseudomonas putida KT2440

Subject, 632 a.a., 1-deoxy-D-xylulose-5-phosphate synthase from Pseudomonas simiae WCS417

 Score = 55.8 bits (133), Expect = 3e-12
 Identities = 59/237 (24%), Positives = 97/237 (40%), Gaps = 35/237 (14%)

Query: 54  RVFDAPISESGIVGTAVGMGAYGLRPVVEIQFADYFYPASDQIVSELARLRYRSAGEFIA 113
           R FD  I+E   V  A GM   G +PVV I ++ +     DQ+V ++A          + 
Sbjct: 370 RYFDVAIAEQHAVTFAAGMACEGAKPVVAI-YSTFLQRGYDQLVHDVA----------VQ 418

Query: 114 PLTLRMPCG-GGIYG--GQTHSQSPEAMFTQ-VCGLRTVMPSNPYDAKGLLIASIECDDP 169
            L +       G+ G  G TH+ S +  + + + G+  + PS+  + + +L         
Sbjct: 419 NLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENELRKMLSTG------ 472

Query: 170 VIFLEPKRLYNGPFDGHHDRPVTPWSKHPHSAVPDGYYTVPLDKAAITRPGNDVTVLTYG 229
                   LYNGP    +     P    P++ +      + + K  + R G+    L +G
Sbjct: 473 -------HLYNGPAAVRY-----PRGNGPNAVIEKDLEPIEIGKGIVRRQGSKTAFLVFG 520

Query: 230 TTVYVAQVAAEESGVDAEVIDLRSLWPLDLDTIVESVKKTGRCVVVHEATRTCGFGA 286
             +  A   AE+  +DA V+D+R + PLD   + E        V V E     G GA
Sbjct: 521 VQLAEALKVAEK--IDATVVDMRFVKPLDEALVREIAGSHELLVTVEENAIMGGAGA 575