Pairwise Alignments

Query, 339 a.a., branched-chain alpha-keto acid dehydrogenase complex, beta subunit from Pseudomonas putida KT2440

Subject, 631 a.a., 1-deoxyxylulose-5-phosphate synthase from Pseudomonas putida KT2440

 Score = 58.9 bits (141), Expect = 3e-13
 Identities = 58/237 (24%), Positives = 100/237 (42%), Gaps = 35/237 (14%)

Query: 54  RVFDAPISESGIVGTAVGMGAYGLRPVVEIQFADYFYPASDQIVSELARLRYRSAGEFIA 113
           R FD  I+E   V  A GM   G +PVV I ++ +   A DQ++ ++A          + 
Sbjct: 369 RYFDVAIAEQHAVTLAAGMACEGSKPVVAI-YSTFLQRAYDQLIHDVA----------VQ 417

Query: 114 PLTLRMPCG-GGIYG--GQTHSQSPEAMFTQ-VCGLRTVMPSNPYDAKGLLIASIECDDP 169
            L +       G+ G  G TH+ S +  + + + G+  + PS+  + + +L         
Sbjct: 418 NLDVLFAIDRAGLVGEDGPTHAGSYDLSYLRCIPGMLVMTPSDENELRKMLSTG------ 471

Query: 170 VIFLEPKRLYNGPFDGHHDRPVTPWSKHPHSAVPDGYYTVPLDKAAITRPGNDVTVLTYG 229
                   LYNGP    +     P    P++ +      + + K  + R G  V +L +G
Sbjct: 472 -------HLYNGPAAVRY-----PRGTGPNAPISGDLQPLEIGKGVVRRQGEKVALLVFG 519

Query: 230 TTVYVAQVAAEESGVDAEVIDLRSLWPLDLDTIVESVKKTGRCVVVHEATRTCGFGA 286
             +  A   AE+  ++A V+D+R + PLD   ++E        V + E     G GA
Sbjct: 520 VQLAEAMQVAEQ--INATVVDMRFVKPLDEALVLELAGSHELLVTIEENAIMGGAGA 574