Pairwise Alignments

Query, 247 a.a., Flagellar brake protein YcgR from Pseudomonas putida KT2440

Subject, 249 a.a., pilus assembly protein PilZ from Pseudomonas simiae WCS417

 Score =  363 bits (933), Expect = e-105
 Identities = 177/244 (72%), Positives = 208/244 (85%), Gaps = 2/244 (0%)

Query: 3   NESDAPQPPKVLSTPLEIAANLRQLQESHDPLIITFHDRSHRFQSYVVHVDRESNTLALD 62
           N  DAPQPPKVL+TPLEIA+ LR LQ+SHDPLIITFH+RS RFQSY+V V+R+S TLALD
Sbjct: 6   NAEDAPQPPKVLTTPLEIASTLRMLQDSHDPLIITFHERSQRFQSYLVDVNRDSGTLALD 65

Query: 63  EMIPRDGEKFIENGEHFRVEGFHDGVRIAWECDHALKISEVDGHRCYSGPLPQEVTYHQR 122
           EMIPRDGE+++ENGE FR+EGFH+GVR+AWE + +L ISE DGHR Y+G +P EV YHQR
Sbjct: 66  EMIPRDGERYLENGEPFRIEGFHEGVRVAWESNGSLSISEKDGHRIYTGNMPDEVVYHQR 125

Query: 123 RNAFRAALKLSQLVDIILDGAHLKGNGAMRGKLLDISATGCKLRFEGNVEDRLQLGQVYE 182
           RNAFRAALKL+QLV+I L G  LK    + GKLLDISATGCKLRFEG++ +RLQLGQVY+
Sbjct: 126 RNAFRAALKLAQLVNIELGGEKLK--APISGKLLDISATGCKLRFEGDISERLQLGQVYD 183

Query: 183 RFKAGNPLGLVDTMVELRHLHYEERINTTFAGVRFHNLSGQAQRKIESFVYQLQREARRF 242
           RF A  P G + T VELR+LH+EE+INTTFAGVRFHN+SG  QR++E FVYQLQREARRF
Sbjct: 184 RFIAALPFGSMTTAVELRYLHFEEKINTTFAGVRFHNMSGLVQRQVERFVYQLQREARRF 243

Query: 243 DKDD 246
           DKDD
Sbjct: 244 DKDD 247