Pairwise Alignments

Query, 309 a.a., putative chemotaxis protein from Pseudomonas putida KT2440

Subject, 300 a.a., chemotaxis protein CheW from Pseudomonas simiae WCS417

 Score =  185 bits (470), Expect = 1e-51
 Identities = 105/286 (36%), Positives = 167/286 (58%), Gaps = 10/286 (3%)

Query: 20  LELLLFRLNGEQLYGINVFKVREVLQCPALTLLPKAHPVVRGVANIRGATIPILDLSMAT 79
           L LLLF L   +L  IN+ KV E++ CP L  LP++HP V+G+A +RG ++ ++DLS A 
Sbjct: 11  LSLLLFTLRSGKLMAINLLKVSEIIPCPPLIKLPESHPHVKGIATLRGNSLAVIDLSRAL 70

Query: 80  GLRPLQEDTRNSFVIITEYNTKTQGFLVHSVERIVNMNWEEIHPPPKGTGRDH-YLTAVT 138
           G  PL  D     +I+T+ +   QG  V +V +IV+    +I PPP G+G +  ++T VT
Sbjct: 71  GEMPL-ADPDGGCLIVTDVSRSKQGLHVQAVSKIVHCLTTDIRPPPYGSGGNRAFITGVT 129

Query: 139 RVDNRMVEIIDVEKVLAEVSPSSESVSAGVIDAEVQDKAVL--MRVLTVDDSSVARKQVS 196
           +V+  +V+++D+EKV+  ++P+   + A   D  +++  VL   R+L VDDS VA +Q  
Sbjct: 130 QVEGGLVQVLDIEKVIHGIAPA--PIEAAPTDLTMEEAEVLGNARILVVDDSQVALQQSV 187

Query: 197 RCLQTVGVEVVALNDGRQALNYLRQLVDEGKKPEEEFLMMISDIEMPEMDGYTLTAEIRS 256
             L+ +G+        ++A++ L +L    +   E+  +++SDIEM EMDGY LT  +R 
Sbjct: 188 HTLRNLGLTCHTARSAKEAIDVLLEL----QGTVEQINVVVSDIEMSEMDGYALTRTLRE 243

Query: 257 DPRMQKLHICLHTSLSGVFNQAMVKKVGADDFLAKFKPDDLAQRVV 302
            P  Q L++ LHTSL    N    +  GAD  L KF   +L + +V
Sbjct: 244 TPDFQHLYVLLHTSLDSAMNSEKARLAGADAVLTKFSSPELTKCLV 289