Pairwise Alignments

Query, 246 a.a., flagellar basal-body rod protein FlgF from Pseudomonas putida KT2440

Subject, 251 a.a., flagellar component of cell-proximal portion of basal-body rod (NCBI) from Escherichia coli BW25113

 Score =  174 bits (442), Expect = 1e-48
 Identities = 98/240 (40%), Positives = 136/240 (56%), Gaps = 7/240 (2%)

Query: 1   MDKLLYVAMTGASQNALAQKAHANNLANISTNGFQRDLEQARSMPVFGDSFPARAFAMTE 60
           MD  +Y AM  ASQ    Q   A+NLAN ST GF+  L   R++PV G S P R      
Sbjct: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAVPVEGLSLPTRTLVTAS 60

Query: 61  RPATDFSEGPLVETGRDLDVAVTGKGFIAVQAPDGSEAYVRTGSLNIDALGVLRAGNGMP 120
            P  D + G +  T R LDVA+   G++AVQ  DGSE Y R GS+ +D  G L    G P
Sbjct: 61  TPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQLTI-QGHP 119

Query: 121 VIGNGGPIAIPPEQKVEVGADGTISIRSMGEDPRVMAEVDRIKLVNPDTKGLTKGLDGLI 180
           VIG  GPIA+P   ++ + ADGTIS  + G+    +A V R+KLV      + +G DG+ 
Sbjct: 120 VIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDDGIF 179

Query: 181 ------HTTSGQPADADVNVRVVAGFLEGSNVNAVEEMTSVLALSRQFELHVKMMNTAKE 234
                   T G    AD  +RV++G LEGSNVNAV  M+ ++A +R+FE+ +K++++  +
Sbjct: 180 RLSAETQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDD 239