Pairwise Alignments

Query, 680 a.a., Flagellar hook-associated protein FlgK from Pseudomonas putida KT2440

Subject, 654 a.a., Flagellar hook-associated protein FlgK from Variovorax sp. SCN45

 Score =  347 bits (891), Expect = e-100
 Identities = 235/688 (34%), Positives = 358/688 (52%), Gaps = 54/688 (7%)

Query: 3   SLISIGLSGLSASQAALSVTSNNIANAATSGYSRQQTVQAAGPSHNIGAGFLGTGTTLAD 62
           S+   GLSGL  ++AAL  T++N AN  T+GYSRQ    A G + + G+G++GTG  +  
Sbjct: 4   SMFYTGLSGLGVARAALMTTAHNTANVYTAGYSRQVAEIATGGAISSGSGYIGTGANVTT 63

Query: 63  VRRIYSSYLDNQLQTATSLQADSVTFQDQITSVDKLLADRDTGISSVLTAFFSALQTAAA 122
           V R Y  YL  QL +A S      T   QI  +D LLAD+ +GIS+++  FF+++Q  A 
Sbjct: 64  VSRSYDRYLTAQLASAQSNSVALATNGTQINRIDTLLADKTSGISALMQNFFTSIQGVAN 123

Query: 123 KPGDVASRQLLLTQAQTLSNRFNAVSTQLTQQNATINSQLDTMAGQVNKLTANIAEYNKQ 182
            P D A+RQ +++ AQ L+++F +    L+  N ++N Q+D    Q+N     IA  N+Q
Sbjct: 124 TPADPAARQQMISSAQALASKFRSTDQYLSDLNTSVNEQIDGSVEQINVYATKIASLNQQ 183

Query: 183 ITAAS--ASGNTPNSLLDARSEAVRQLNELVGVTVQERD-GNYDVYLGSGQSLVTGTKAN 239
           I+ A+  ASG  PN LLD R   V QL+++V V V ++D G Y+V++ +GQSLV G  A+
Sbjct: 184 ISQATAMASGQPPNDLLDQRDLLVSQLSQVVDVKVLQQDNGKYNVFIATGQSLVVGDYAS 243

Query: 240 TLSVEPGVADKSQ--VALRINYDSFSSDVTSVVSGGAIGGLLRYRQDVLTPSMNELGRVA 297
            +      AD ++  VAL+    + +    S   GG +GGL+ +R + L P+ N +GR+A
Sbjct: 244 QMVSVNSAADPTRKVVALKGFGGNTAELDDSTFKGGVLGGLMTFRSETLIPTQNSIGRLA 303

Query: 298 LVVADSINSQLGQGLDANGQFGSSLFSSINSATAIAQRSLASSNNSAGSGNLD--VTIAN 355
           + V+D++N+Q   G+D NG  G + F+         Q      +N+  +GNL+   T+ +
Sbjct: 304 MSVSDAVNAQHKLGVDLNGALGQNFFN---------QAVPGVMSNAKNTGNLEFGATLTD 354

Query: 356 SGALTTYDYEVKFTSAS---QYSVRR-SDGTDMGSFDLNADPAPV-IDGFSLALKGGGLA 410
           +  LTT DY+V  T+ +    Y+V R SD T MGSF       P+  DG SL    G   
Sbjct: 355 ASKLTTSDYDVSVTNVAGTLTYTVTRLSDKTSMGSF----TTFPITFDGVSLNAASGTAQ 410

Query: 411 AGDSFKVIPTRAAAGSITTTLTDANKLAFAGPISAAAGSGNSGTGTITQPTLGESLDIYG 470
           AGDSF V PTR  A  +   + D  K+A A P+     +GN G   ++  T+  S   Y 
Sbjct: 411 AGDSFLVQPTRTGARDLDVLVRDPAKVAAASPLVTGNTAGNKGNAALSAATVDAS---YP 467

Query: 471 GADTALIQQSIRDSMPVRVVFDAASGGSQGYKLFDAKGTQIGTGSVVPGQDNKLSIAVPM 530
           G   A          PV + FDAA+G   G+    A    +  G+               
Sbjct: 468 GTPLA---------GPVTLSFDAATGTLSGFPATSAVTVTLANGT-------------ST 505

Query: 531 LDAAGDPILDGSGNPRTF-AVETTIGGSPAANDSFTLSFNADGKADNRNANALLDLQTKS 589
             AAG  +   +G   +F  V  ++ G+P+  D+FT+  N  G +D  NA  L  LQ K+
Sbjct: 506 TYAAGAAVPYTAGAKMSFDGVTVSMTGAPSQGDTFTIKNNTSGVSDGSNALLLGALQRKT 565

Query: 590 TVGTNSGTGTSFTSAYASLVERVGAKASQATIDTTATQAVLKSATESRSAVSGVNLDDEA 649
           T+   + T   F  AY+ LV  VG +A    +      +V      S+ +VSGV  D+E 
Sbjct: 566 TMANGTAT---FNGAYSQLVSEVGNRAMAVKVAAATQDSVTGQIKASQQSVSGVVQDEET 622

Query: 650 ASLVKFQHYYTASSQIIKAAQETFSTLI 677
           A+L+ FQ  Y A++++I+ A   F  ++
Sbjct: 623 ANLLMFQQMYQANAKVIQTASTMFDAIL 650



 Score = 26.6 bits (57), Expect = 0.004
 Identities = 18/93 (19%), Positives = 38/93 (40%), Gaps = 3/93 (3%)

Query: 1   MSSLISIGLSGLSASQAALSVTSNNIANAATSGYSRQQTVQAAGPSHNIGAGFLGTGTTL 60
           + +L++   SG+SA       +   +AN      +RQQ + +A     + + F  T   L
Sbjct: 96  IDTLLADKTSGISALMQNFFTSIQGVANTPADPAARQQMISSA---QALASKFRSTDQYL 152

Query: 61  ADVRRIYSSYLDNQLQTATSLQADSVTFQDQIT 93
           +D+    +  +D  ++          +   QI+
Sbjct: 153 SDLNTSVNEQIDGSVEQINVYATKIASLNQQIS 185