Pairwise Alignments

Query, 680 a.a., Flagellar hook-associated protein FlgK from Pseudomonas putida KT2440

Subject, 858 a.a., flagellar hook-associated protein FlgK from Magnetospirillum magneticum AMB-1

 Score = 97.1 bits (240), Expect = 3e-24
 Identities = 133/546 (24%), Positives = 216/546 (39%), Gaps = 65/546 (11%)

Query: 5   ISIGLSGLSASQAALSVTSNNIANAATSGYSRQQTVQAAGPSHNIGAGFLGTGTTLADVR 64
           ++  LSGL  +Q  L V S N+ N  T GY R+Q      P   + AG +G G     + 
Sbjct: 7   LNSALSGLLTNQKGLDVISQNVVNVNTKGYVRKQMT----PESRVVAG-VGAGVQQGALT 61

Query: 65  RIYSSYLDNQLQTATSLQADSVTFQDQITSVDKLLAD--RDTGISSVLTAFFSALQTAAA 122
           R     L   ++  TS Q      Q     ++ +         IS  +    ++ +T A 
Sbjct: 62  RNVDEGLMRDIRRQTSTQGALDVTQTYYPRLEDMFGTVGSSNSISHQIETLQASFETLAT 121

Query: 123 KPGDVASRQLLLTQAQTLSNRFNAVSTQLTQQNATINSQLDTMAGQVNKLTANIAEYNKQ 182
           +    A +   +  A  ++++FN ++T +       +  L    GQVNK   +I + N++
Sbjct: 122 QVNTPAFQSSTVQTANDMTDQFNEMTTHMQNLRLEADRALHDTTGQVNKQLEDIFDLNQK 181

Query: 183 ITAASASGNTPNSLLDARSEAVRQLNELVGVTVQER-DGNYDVYLGSGQSLVTGTKANTL 241
           I   +A G     L D R  A+  L++ + +   ER DG+  V+  SG++LV    A   
Sbjct: 182 IVRNNAIGGDIGDLQDKRDNALTTLSKYMDIQYFERGDGSVGVFTKSGKTLVDKGPAVLS 241

Query: 242 SVEPGVADKSQVALRINYDSF------SSDVTSVVSGGAIGGLLRYRQDVLTPSMNELGR 295
            V   + D    +   N++        S DV   ++ G +  LL  R  ++     ++  
Sbjct: 242 HVATTITDSWMTSAGGNFNKLTLSTTDSPDVGEDINDGEVRALLDLRDTIVPNLQAQIDE 301

Query: 296 VALVVADSINSQLGQGLDANGQFGSSLFSSINSATAIAQRSLASSNNSA----------G 345
           VA  + D++N    +G         ++F +  S+  +  R LA  NN A           
Sbjct: 302 VASKLKDAVNQVHNRG---------TIFPT-QSSKMVGTRQLADPNNPALNGSNPQNIWF 351

Query: 346 SGNLDVTIA------NSGALTTYDYEVKFTSASQYSVRRSDGTDMGSFDLNADPAPVIDG 399
           SGN D TIA      N  A TT        S++ Y+      T +   D  A   P +  
Sbjct: 352 SGNDDTTIALFDTNGNQLAATTVR---TIMSSTSYTDAAGAATALDISD--AATTPGVKM 406

Query: 400 FSLALKGGGLAAGDSFKVIPTRAAAGSITT------TLTDANKLAFAGPISAAAGSGNS- 452
             +A K        S++     AA+ S++T      T   +  LAF    + AAGS  + 
Sbjct: 407 TDVAAKIQSWMRQQSYQGNIMSAASASVSTGTLVLDTGVPSVTLAFRDQKATAAGSAAAD 466

Query: 453 --------GTGTITQPTLGESLDIYGGAD--TALIQQSIRDSMPVRVVFDAASGGSQGYK 502
                   G     +   G S + +G  D  TA +  SI DS  V    D   G ++ + 
Sbjct: 467 ARINFDVDGDNKADKQVAGFS-NFFGLNDFFTASVPNSIVDSDVVSK--DFTLGAARSFT 523

Query: 503 LFDAKG 508
           L D  G
Sbjct: 524 LSDPTG 529



 Score = 65.5 bits (158), Expect = 1e-14
 Identities = 48/143 (33%), Positives = 70/143 (48%), Gaps = 12/143 (8%)

Query: 547 TFAVETTIGGSPAANDSFTLSFNAD------GKADNRNANALLDLQTKSTVGTNSGT--- 597
           T AV T I GSPA     ++ +N D       + DN  A AL    +  T    +G+   
Sbjct: 714 TIAVRTDIQGSPAKVSRGSMQYNTDLGKYFLSEGDNTTALALGAAMSSKTDMATAGSLYA 773

Query: 598 -GTSFTSAYASLVERVGAKASQATIDTTATQAVLKSATESRSA-VSGVNLDDEAASLVKF 655
              +F    A+ + +V   A+ A  D    Q  L  A  S+ A  SGVNLD+E A+++ F
Sbjct: 774 GSYTFAEHAAASIAQVSTDAAHAK-DRQDYQTTLGQALNSQFASTSGVNLDEEVANMINF 832

Query: 656 QHYYTASSQIIKAAQETFSTLIN 678
           Q  Y+AS+++I   QE   TL+N
Sbjct: 833 QQAYSASAKVISTLQEMLDTLVN 855