Pairwise Alignments

Query, 452 a.a., flagellar filament capping protein from Pseudomonas putida KT2440

Subject, 462 a.a., flagellar cap protein FliD from Pseudomonas simiae WCS417

 Score =  419 bits (1076), Expect = e-121
 Identities = 226/462 (48%), Positives = 310/462 (67%), Gaps = 13/462 (2%)

Query: 1   MASTTVSGIGSGVDTQSIVKALADAEKAPKQQQITTQQKTTTTQVSAVGMIKNALDTFRS 60
           MASTTV+G+GSG+D Q IVK+L DA++APKQ QI TQ +  TTQ+S++G I++ALD FR 
Sbjct: 1   MASTTVNGVGSGIDIQGIVKSLVDADRAPKQTQINTQSQKATTQLSSIGKIQSALDAFRG 60

Query: 61  AIAKLNTSTSFTGLAGTSSDEKVAKATVTASASAGNYALEVTQLATSSKITTDVFAGGVS 120
           AI  +    SF+GL GTSS+EKVA  T    A+ G++ L V QLA  SK++T    GG S
Sbjct: 61  AIKSMTDDNSFSGLTGTSSNEKVATMTTGKGAANGSFNLVVNQLAQPSKLSTTTLTGGAS 120

Query: 121 SVVNNSGDPQTLTISQSSADYNVTIPDGATLQQVRDLINKQLGSQGINANILTDAKGSRL 180
           +VVN      TL+ISQS   ++V++P GATLQQVRD IN Q G+ G++ANI+TDA GSR+
Sbjct: 121 TVVNKGDTATTLSISQSGKKFDVSVPPGATLQQVRDSINSQFGTSGLSANIVTDASGSRM 180

Query: 181 VMSSSTTGEGSDITLSGDSSLVQNATPGAPAQNAKYTIDGLELESKSNTVTGAISGVNFE 240
           V++S+T G GSD+TLSG+S +          +NA+YTIDG+   +K+N +T A+SGV+ +
Sbjct: 181 VLTSTTGGVGSDLTLSGNSGIDTGYKVIDEPKNAEYTIDGVAYTAKTNNITDAVSGVSIK 240

Query: 241 LLA-----------EGKSRLSVATNTTTLKTSVQSFVSAYNALITAINTQTKVTATGDAS 289
           LL+           +  + +SV+T+T  LK+ V+ FV +YNAL+ A+N +TKVT    A 
Sbjct: 241 LLSVSPPVSSTDPTKAVTTISVSTSTAALKSGVKGFVDSYNALLKAMNAETKVTKDA-AG 299

Query: 290 TTTAGALTGDATMRALVSTVRNELVKSTGAGSISMLSQMGINTDQQTGLLVLDDTKWDKA 349
            + +  LTGDA MR+L S +R+E    +G G    L+Q GI TD  TGLL +DD  +DKA
Sbjct: 300 NSVSATLTGDANMRSLQSALRSEFNALSGNGQFKSLAQFGIGTDSNTGLLTMDDKAFDKA 359

Query: 350 VAKGAADIAAVFTGDKGLIKRMTAATDAYT-GTTGILATRTKNLNDNLTELTKQQEALDR 408
               AADI ++  G  GL+ RMTAATD Y   TTG+ ATR+  L+D+L +LTK Q  LD 
Sbjct: 360 ALTNAADINSMLGGKDGLLARMTAATDGYAKPTTGVFATRSSALSDSLKKLTKDQSDLDA 419

Query: 409 RIETLTATLTAKYNAMDTLVAKLNATSSSVMTTLNAMNKANN 450
            ++ LT +LT KY AMD+LVA+L   S+++M TLNA+N   N
Sbjct: 420 HVQDLTDSLTRKYAAMDSLVAQLRQQSNNIMGTLNALNNQKN 461