Pairwise Alignments

Query, 452 a.a., flagellar filament capping protein from Pseudomonas putida KT2440

Subject, 481 a.a., Flagellar cap protein FliD from Variovorax sp. SCN45

 Score =  200 bits (508), Expect = 1e-55
 Identities = 153/491 (31%), Positives = 246/491 (50%), Gaps = 52/491 (10%)

Query: 1   MASTTVSGIGSGVDTQSIVKALADAEKAPKQQQITTQQKTTTTQVSAVGMIKNALDTFRS 60
           MA+ +  G+G+ +D  +++  L  AE  P    +  + K+ T+++SA G I++AL T ++
Sbjct: 1   MATISSLGVGANLDLATLLTQLQTAESQPLVA-LQAKAKSYTSKLSAYGTIQSALGTLQA 59

Query: 61  AIAKLNTSTSFTGLAGTSSDEKVAKATVTASASAGNYALEVTQLAT-------------- 106
           A  KL   T F  + GT +   +  A+ T  +SAGNY ++V QLA               
Sbjct: 60  AAKKLGDPTLFQSVTGTPTVSGILSASSTDVSSAGNYTIDVGQLAQAQTLVSAGQADSKT 119

Query: 107 ---SSKITTD--VFAGGVSSVVNNSGDPQTLTISQSSADYNVTIPDGA-TLQQVRDLINK 160
              S KIT D    +GG  +         T T   S    ++TI     TL+ +RD IN 
Sbjct: 120 AIGSGKITIDFGAISGGTLNATTGQYTGATFTADSSQPAKSITIDSSNNTLEGIRDAING 179

Query: 161 QLGSQGINANILTDAKGS--RLVMSSSTTGEGSDITLS--GDSSLV----------QNAT 206
                G+ A I+ D  G+  RLV++SS TGE S + +S  GD++L           QN  
Sbjct: 180 --AKAGVTAAIVNDGSGTPNRLVLTSSATGEKSSMRISVDGDAALQGLLSNDPAGSQNLK 237

Query: 207 PGAPAQNAKYTIDGLELESKSNTVTGAISGVNFELLAEGKSRLSVATNTTTLKTSVQSFV 266
             A AQNAK  ++G+++ S +NTV  AI G    L+  GK+ L++  N+  +KT++  FV
Sbjct: 238 QTAAAQNAKLNVNGIDVVSATNTVKDAIQGTTLTLVGTGKTGLAMKENSAGVKTAITDFV 297

Query: 267 SAYNALITAINTQTKVTATGDASTTTAGALTGDATMRALVSTVRNELV--KSTGAGSISM 324
            AYN+L +   T T      DA T TA AL GD+T+R L + +R  L   ++ GA  + +
Sbjct: 298 KAYNSLQSTAKTLTAY----DADTKTAAALVGDSTLRNLQTRIRQALTTPQAGGANDMKV 353

Query: 325 LSQMGINTDQQTGLLVLDDTKWDKAVA---KGAADIAAVFTGDKGLIKRMTAA--TDAYT 379
           L+++G+   Q+ G L +D  K DKA+A   KG A++ +  TG  G   +   A  TD   
Sbjct: 354 LTEIGV-AFQKDGTLAVDSDKLDKALAANLKGVANLFSSATGSTGGYGKQIDAIVTDL-- 410

Query: 380 GTTGILATRTKNLNDNLTELTKQQEALDRRIETLTATLTAKYNAMDTLVAKLNATSSSVM 439
             T  L   +  +   + +L  Q +A+  R++        ++N +D L+  LN T + + 
Sbjct: 411 -NTNALKVASDGVTSTIKKLDDQYDAMQVRVDATVDRYRKQFNQLDVLINNLNNTKNYLT 469

Query: 440 TTLNAMNKANN 450
               AM+ +++
Sbjct: 470 QQFEAMSGSSS 480