Pairwise Alignments

Query, 491 a.a., Transcriptional regulator FleQ from Pseudomonas putida KT2440

Subject, 453 a.a., Two component, Sigma-54 Specific, central transcriptional regulator of acidic amino acid uptake from Variovorax sp. SCN45

 Score =  262 bits (670), Expect = 2e-74
 Identities = 188/482 (39%), Positives = 255/482 (52%), Gaps = 53/482 (10%)

Query: 6   KILLIDDDSARRRDLAVVLNFLGEENLACASHDWQQAVEPLSSSREVLCVLIGTVNAPG- 64
           ++LL++DD   R     VL   G E  A AS +  +A      S  V  ++I  V  PG 
Sbjct: 8   RVLLVEDDEDVRLSTTQVLTLAGFEVEAFASAERARA----HISFGVPAIVISDVRLPGM 63

Query: 65  ---NLLGLLKTVATWDEFLPVLLL-GEISSAELPEDLRRRVLSNLEMPPSYSQLLDSLHR 120
                LG L T    D  LPV+L+ G    A   + +R      +E P S  +L+  +  
Sbjct: 64  SGTEWLGELHTA---DAELPVILVTGHGHIAMAVQAMREGAYDFIEKPFSSERLVAIVRH 120

Query: 121 AQVYREMYDQARE-RGRQREPNLFRS-LVGTSRAIQHVRQMMQQVADTDASVLILGESGT 178
           A   R++  Q R  R      N  +S L+G S  +Q VR+ +  +A+T A VLI GE+GT
Sbjct: 121 AIERRQLTLQVRTLRDALENWNGIQSVLIGRSAQMQQVRRTVMTLAETSADVLIYGETGT 180

Query: 179 GKEVVARNLHYHSKRREAPFVPVNCGAIPAELLESELFGHEKGAFTGAITSRAGRFELAN 238
           GKE+VA+ LH HS+RR   FVP+NCG +P  L ESELFGHE GAFT A  +R G+FE AN
Sbjct: 181 GKELVAQCLHAHSERRRRHFVPLNCGGLPEALAESELFGHEAGAFTSANRARVGKFEYAN 240

Query: 239 GGTLFLDEIGDMPLPMQVKLLRVLQERTFERVGSNKTQSIDVRIIAATHKNLETMIEDGT 298
           GGTLFLDEI  MP+P+Q+KLLR LQER+ ER+GSNK    D R++AA+ ++L+ M +   
Sbjct: 241 GGTLFLDEIESMPMPVQIKLLRALQERSIERIGSNKAIPFDCRVVAASKEDLKEMSDRQK 300

Query: 299 FREDLYYRLNVFPIEMAPLRERVEDIPLLMNE--LISRMEHEKRGSIRFNSASIMSLCRH 356
           FR DLYYRL V  IE+ PLRER EDIPLL     L++   +E R +    +A +  L  +
Sbjct: 301 FRADLYYRLGVAFIELPPLRERREDIPLLFEHFTLLAANRYE-RAAQPLTNAQLADLMAY 359

Query: 357 GWPGNVRELANLVERMAIMHPYGVIGVSELPKKFRYVDDEDEQMVDSLRSDLEERVAING 416
            WPGNVREL N+ +R  +    G++G                           ER+    
Sbjct: 360 AWPGNVRELRNVADRFVL----GLLG---------------------------ERL---- 384

Query: 417 HTPNFSNHAMLPPEGLDLKDYLGSLEQGLIQQALDDANGIVARAAERLRIRRTTLVEKMR 476
            T        LP     L   + + E+ +I +AL    G     A  L I R TL +K+R
Sbjct: 385 -TQTRGTGEGLPALPRALPQQVEAFERAVIVEALRKHKGDQPATAAALAIARQTLHDKLR 443

Query: 477 KY 478
           K+
Sbjct: 444 KF 445