Pairwise Alignments

Query, 405 a.a., Sensory box histidine kinase FleS from Pseudomonas putida KT2440

Subject, 782 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score = 91.3 bits (225), Expect = 9e-23
 Identities = 102/401 (25%), Positives = 166/401 (41%), Gaps = 79/401 (19%)

Query: 64  AQRIDELSEKERLANRLQN-LLDLLPGGVIVIDGQGLVREANPAACELLGEPLIGQLWRQ 122
           A+++ E  +  +++  +++ +LD     ++ IDG G + E NPAA     E + G L + 
Sbjct: 265 ARKLREELDAHQVSEEVKSSILDAALDAIVTIDGNGAIIEFNPAA-----ERIFGHLEQD 319

Query: 123 VIARSFA----PRKD-------------------------------DGHEVSLRDGRRLS 147
           V+ +  A    P +                                DGHE+ L       
Sbjct: 320 VVGKEIADLIIPEQHRAAHRAGIARVIDGGVTKVIGQRLEMHGLHADGHEIPLE------ 373

Query: 148 IATRSLDAEPGQLVLLNDLTETRRLQDQLARHERLSSLGRMVASLAHQIRTPLSAAM--- 204
           +A   L         + DLT  +R ++ L R ++L ++G++   +AH     L       
Sbjct: 374 LAITQLPTHGLFTGFIRDLTGQKRTEEALRRSQKLEAVGQLTGGIAHDFNNLLGIITGNL 433

Query: 205 -LYAGHLADNEQAL----SAQTRQRFAATLKERLHELEHQVRDMLVFARGELPLGDRVTP 259
            L   +LA++E+A     +A    R  A L  RL     Q     V     + + D VT 
Sbjct: 434 ELLQKNLANDEKANRRLDTALKSARRGADLTRRLLAFSRQAPT--VVGNDPIDINDAVT- 490

Query: 260 KALFQALQQAAQAHVQGHAVRWQCDSHLGELLCNRDTLVGALLNLIENALQASDGPARLK 319
             +   LQ++    VQ   V+ + D  L + + NR     ALLNL  NA  A      L 
Sbjct: 491 -GMLDMLQRSLTQIVQ---VKTKLDPALWKTVVNRSEFEDALLNLAINARDAMPDGGTLA 546

Query: 320 VHLY---------RRERSLH------LCVSDAGSGIDAGLLGRLGEPFLTTK--ATGTGL 362
           +            R + +L       L VSD+G+GI   ++ ++ EPF TTK    GTGL
Sbjct: 547 IETSNIVVEAEHARFDPNLQPGEYIVLMVSDSGTGISKDIVDKIFEPFFTTKERGKGTGL 606

Query: 363 GLAVVKAVVRAHQGTINLRSKVGRGTCVRVELPLIDGQLAE 403
           GL++V    R   G + + S++G GT  R+  P     +A+
Sbjct: 607 GLSMVYGFARRSGGHVRVYSELGVGTAFRLYFPRSHAHVAD 647