Pairwise Alignments

Query, 451 a.a., two component system AtoC DNA-binding transcriptional activator from Pseudomonas putida KT2440

Subject, 458 a.a., Fis family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  696 bits (1797), Expect = 0.0
 Identities = 368/456 (80%), Positives = 397/456 (87%), Gaps = 6/456 (1%)

Query: 1   MAIKVLLVEDDRVLRQALGDTLEIGGFAYQAVGSAEEALEAVLEDAFSLVVSDVNMPGMD 60
           MAIKVLLVEDDR LR+AL DTL + G  Y+AVGSAE ALEAV +++FSLVVSDVNMPGMD
Sbjct: 1   MAIKVLLVEDDRALREALADTLLLAGHDYRAVGSAEAALEAVEQESFSLVVSDVNMPGMD 60

Query: 61  GHQLLSQLRRQQPQLPVLLMTAHAAVERAVEAMRQGAADYLVKPFEPKALLNLVERHAAG 120
           GHQLL  LR +QPQLPVLLMTAH AVERAV+AMRQGAADYLVKPFEPKAL+ LV RHA G
Sbjct: 61  GHQLLGLLRARQPQLPVLLMTAHGAVERAVDAMRQGAADYLVKPFEPKALIELVVRHALG 120

Query: 121 RV--TGEEGPVACEPASRQLLELAARVARSDSTVLISGESGTGKEVLARYIHQQSPRAAQ 178
            +  +  EGP+A EPAS QLLELAARVARSDSTVLISGESGTGKEVLARYIHQQS RA Q
Sbjct: 121 VIPPSDGEGPIAFEPASAQLLELAARVARSDSTVLISGESGTGKEVLARYIHQQSTRAKQ 180

Query: 179 PFVAINCAAIPDNMLEATLFGHEKGAFTGAIAAQAGKFEQAEGGTLLLDEISEMPMALQA 238
           PF+AINCAAIPDNMLEATLFGHEKG+FTGAIAAQAGKFEQA+GGT+LLDEISEMP+ LQA
Sbjct: 181 PFIAINCAAIPDNMLEATLFGHEKGSFTGAIAAQAGKFEQADGGTILLDEISEMPLGLQA 240

Query: 239 KLLRVLQEREVERVGGRKPISLDIRVLATTNRDLAGEVAAGRFREDLYYRLSVFPLAWRP 298
           KLLRVLQEREVERVG RKPI LDIRV+ATTNRDLAGEVAAGRFREDL+YRLSVFPLAWRP
Sbjct: 241 KLLRVLQEREVERVGARKPIQLDIRVVATTNRDLAGEVAAGRFREDLFYRLSVFPLAWRP 300

Query: 299 LRERPGDILQLAERLLARHVAKMKHASVRLSPAARACLQAYAWPGNVRELDNALQRALIL 358
           LRERP DI+ LAERLL  HV KMKHA   LS  A+ACL AY WPGNVRELDNA+QRALIL
Sbjct: 301 LRERPADIIPLAERLLNNHVKKMKHAQAGLSAEAQACLIAYPWPGNVRELDNAIQRALIL 360

Query: 359 QQGGVIEAADFCLA---GAIPLSAGTEPSLEVVAD-AGGLGDDMRRHEYQMIIDTLRAER 414
           QQGG+I+  DFCLA   GA PL       + V A+ AG LGDD+RR E+QMIIDTLR+ER
Sbjct: 361 QQGGLIQPQDFCLAMGSGAAPLPTLAPTPVVVEAETAGALGDDLRRREFQMIIDTLRSER 420

Query: 415 GRRKEAAERLGISPRTLRYKLAQMRDAGFDVEASLF 450
           GRRKEAAERLGISPRTLRYKLAQMRDAG DVEA LF
Sbjct: 421 GRRKEAAERLGISPRTLRYKLAQMRDAGMDVEAYLF 456