Pairwise Alignments

Query, 451 a.a., two component system AtoC DNA-binding transcriptional activator from Pseudomonas putida KT2440

Subject, 465 a.a., Fis family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  313 bits (802), Expect = 7e-90
 Identities = 185/458 (40%), Positives = 271/458 (59%), Gaps = 22/458 (4%)

Query: 1   MAIKVLLVEDDRVLRQALGDTLEIGGFAYQAVGSAEEALEAVLEDAFSLVVSDVNMPGMD 60
           M   +L+V+D+  L   L   L          G+   AL+ + ++   LV+SD  MPGMD
Sbjct: 1   MTHNILVVDDEPKLCDLLASALGQNDVQVFIAGNGLHALKVLEQEDIDLVISDWRMPGMD 60

Query: 61  GHQLLSQLRRQQPQLPVLLMTAHAAVERAVEAMRQGAADYLVKPFE--------PKALL- 111
           G  LL++++ + P +PV++MTA++ V+ AV++MR GA DY+ KPF+         KAL  
Sbjct: 61  GPALLAEIKVRYPHVPVIVMTAYSTVKNAVQSMRNGAYDYIAKPFDIDELDITVAKALQF 120

Query: 112 -NLVERHAAGRVTGEEGP-----VACEPASRQLLELAARVARSDSTVLISGESGTGKEVL 165
            +++  +A  R   +E       V   PA R++L+    V  S +T+L++GESGTGKE++
Sbjct: 121 RDIMRDNARLRAELDEHAQFDSLVGDSPAFRKVLQAVDSVRDSSATILLTGESGTGKEMV 180

Query: 166 ARYIHQQSPRAAQPFVAINCAAIPDNMLEATLFGHEKGAFTGAIAAQAGKFEQAEGGTLL 225
           AR IH+   RA +PFVA+NCAAIP+ +LE+ +FGH KGAFTGA+A + G+F+QA+ GTL 
Sbjct: 181 ARAIHKHGSRADKPFVAVNCAAIPEGLLESEMFGHRKGAFTGAVADRVGRFQQADKGTLF 240

Query: 226 LDEISEMPMALQAKLLRVLQEREVERVGGRKPISLDIRVLATTNRDLAGEVAAGRFREDL 285
           LDE+ +MP+ALQAK+LR LQER +E VG  +   +D+RV+A TN++L   VA   FREDL
Sbjct: 241 LDEVGDMPLALQAKILRALQERVIEPVGDPRERKVDVRVIAATNKNLLDAVANKEFREDL 300

Query: 286 YYRLSVFPLAWRPLRERPGDILQLAERLLARHVAKMKHASVRLSPAARACLQAYAWPGNV 345
           YYRL+VFP+    LRER  DI  LA        A         S  A   + AY WPGN+
Sbjct: 301 YYRLNVFPIPLPSLRERVEDIAPLARHFAQTLSATAGKRITGFSAEALQAMAAYHWPGNI 360

Query: 346 RELDNALQRALILQQGGVIEAADFCLAGAIPLSAGTEPSL-EVVADAGGLGDD----MRR 400
           REL N ++RA I+    VIE  D  L G +  S   +  +  +++D  G+  D    +  
Sbjct: 361 RELQNCVERATIVAASPVIE--DIDLPGYLFASKPNQGDVTAILSDGPGIPQDLDAALAE 418

Query: 401 HEYQMIIDTLRAERGRRKEAAERLGISPRTLRYKLAQM 438
            E   I+  L+   G +  AA ++GIS R+  Y+L ++
Sbjct: 419 VEKAYILAALQESNGVQAAAAAKIGISERSFWYRLKKL 456