Pairwise Alignments

Query, 451 a.a., two component system AtoC DNA-binding transcriptional activator from Pseudomonas putida KT2440

Subject, 470 a.a., sigma-54 dependent transcriptional regulator from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  317 bits (812), Expect = 5e-91
 Identities = 183/412 (44%), Positives = 254/412 (61%), Gaps = 23/412 (5%)

Query: 59  MDGHQLLSQLRRQQPQLPVLLMTAHAAVERAVEAMRQGAADYLVKPFEPKALLNLVERHA 118
           +D   L++    ++  +PV+     A    A  A++ GA +++  P  P A   L+    
Sbjct: 55  LDIAALIAANEAERITIPVVAFGVDADAREAAAAIKAGAKEFI--PLPPDA--ELIAAVL 110

Query: 119 AGRVTGEEGPVACEPASRQLLELAARVARSDSTVLISGESGTGKEVLARYIHQQSPRAAQ 178
           +     E+  ++ +P+ + +L+LA +VARS++++LI+GESG GKEV+ARY+H+ S R+ +
Sbjct: 111 SAVADDEKPMISADPSMKAVLQLADQVARSEASILITGESGVGKEVMARYLHEHSRRSER 170

Query: 179 PFVAINCAAIPDNMLEATLFGHEKGAFTGAIAAQAGKFEQAEGGTLLLDEISEMPMALQA 238
           PF+++NCAAIPDN+LE+ LFGHEKGAFTGA+A + GKFE+A+GGTLLLDEISEM   LQA
Sbjct: 171 PFISVNCAAIPDNLLESELFGHEKGAFTGAVARRIGKFEEADGGTLLLDEISEMDARLQA 230

Query: 239 KLLRVLQEREVERVGGRKPISLDIRVLATTNRDLAGEVAAGRFREDLYYRLSVFPLAWRP 298
           KLLR +QER ++RVGG KP+S++IR++AT+NRDLA  VA G FREDL YRL+V  L    
Sbjct: 231 KLLRAIQERVIDRVGGSKPVSVNIRIIATSNRDLAKAVAEGTFREDLLYRLNVVNLRLPS 290

Query: 299 LRERPGDILQLAERLLARHVAKMKHASVRLSPAARACLQAYAWPGNVRELDNALQRALIL 358
           LRERPGDI+ LA+  + ++ A        +S AAR  + A+ WPGNVREL+NA+ RA++L
Sbjct: 291 LRERPGDIVVLADHFIKKYAAANGVPVRPISAAARQAISAHRWPGNVRELENAMHRAVLL 350

Query: 359 QQGGVIEAADFCLAGAIPL----------SAGTEPSLEVVADAGGLGDDMRRH------- 401
             G  I+     L    PL           A   P   V A A    D + R        
Sbjct: 351 ATGPEIDVDAIRLPDGQPLGGMGAGMMAGQAYEAPQAGVAARAAQAADAVTRSFVGQTVA 410

Query: 402 --EYQMIIDTLRAERGRRKEAAERLGISPRTLRYKLAQMRDAGFDVEASLFG 451
             E  +I+DTL    G R  AA  LGIS RTLR KL +  D G  + A + G
Sbjct: 411 AMEKTLILDTLTHCLGNRTHAANILGISIRTLRNKLNEYADEGTAIPAPMSG 462