Pairwise Alignments

Query, 451 a.a., two component system AtoC DNA-binding transcriptional activator from Pseudomonas putida KT2440

Subject, 483 a.a., two component response regulator from Agrobacterium fabrum C58

 Score =  292 bits (747), Expect = 2e-83
 Identities = 184/473 (38%), Positives = 264/473 (55%), Gaps = 36/473 (7%)

Query: 1   MAIKVLLVEDDRVLRQALGDTLEIGGFAYQAVGSAEEALEAVLEDAFSLVVSDVNMPGMD 60
           M   +L+ +DD  +R  L   L   G+  +   +A      V      LVV+DV MP  +
Sbjct: 1   MTATILVADDDAAIRTVLNQALSRAGYDVRITSNAATLWRWVSAGEGDLVVTDVVMPDEN 60

Query: 61  GHQLLSQLRRQQPQLPVLLMTAHAAVERAVEAMRQGAADYLVKPFEPKALLNLVERHAAG 120
              LL ++++ +P LPVL+M+A      A++A  +GA DYL KPF+   L+ ++ R  + 
Sbjct: 61  AFDLLPRIKKARPDLPVLVMSAQNTFMTAIKASEKGAYDYLPKPFDLTELIAIIGRALSE 120

Query: 121 RVTG--------EEGP--VACEPASRQLLELAARVARSDSTVLISGESGTGKEVLARYIH 170
                       ++G   V    A +++  + AR+ ++D T++I+GESGTGKE++AR +H
Sbjct: 121 PKRKPAKLDDDMQDGMPLVGRSAAMQEIYRVLARLMQTDLTLMITGESGTGKELVARALH 180

Query: 171 QQSPRAAQPFVAINCAAIPDNMLEATLFGHEKGAFTGAIAAQAGKFEQAEGGTLLLDEIS 230
               R   PFVAIN AAIP +++E+ LFGHEKGAFTGA     G+FEQAEGGTL LDEI 
Sbjct: 181 DYGKRRNGPFVAINMAAIPRDLIESELFGHEKGAFTGAQNRSTGRFEQAEGGTLFLDEIG 240

Query: 231 EMPMALQAKLLRVLQEREVERVGGRKPISLDIRVLATTNRDLAGEVAAGRFREDLYYRLS 290
           +MPM  Q +LLRVLQ+ E   VGGR PI  D+R++A TN+DL   +  G FREDLYYRL+
Sbjct: 241 DMPMDAQTRLLRVLQQGEYTTVGGRTPIRTDVRIVAATNKDLKQSINQGLFREDLYYRLN 300

Query: 291 VFPLAWRPLRERPGDILQLAERLLARHVAKMKHASVRLSPAARACLQAYAWPGNVRELDN 350
           V PL   PLR+R  DI  L    + +   K      R    A   ++AYAWPGNVREL+N
Sbjct: 301 VVPLRLPPLRDRAEDIPDLVRHFI-QTGEKEGLEGKRFETEALEVMKAYAWPGNVRELEN 359

Query: 351 ALQRALILQQGGVI-----------EAADFCL------AGAIPLSAGTEPSL-EVVADAG 392
            ++R + L    VI           +  D  L       G++ +S   E ++ +  A  G
Sbjct: 360 LIRRLMALYPQEVITREIIEQELQSDVPDSPLDKMAVRTGSLTISQAVEENMRDYFASFG 419

Query: 393 ------GLGDD-MRRHEYQMIIDTLRAERGRRKEAAERLGISPRTLRYKLAQM 438
                 GL D  +R  EY +I+  L A RG + +AA+ LG++  TLR K+ ++
Sbjct: 420 DGLPPPGLYDRVLRELEYPLILAALTATRGNQIKAADLLGLNRNTLRKKIREL 472