Pairwise Alignments

Query, 380 a.a., flagellin export apparatus, substrate specificity protein from Pseudomonas putida KT2440

Subject, 364 a.a., Flagellar biosynthesis protein FlhB from Variovorax sp. SCN45

 Score =  173 bits (438), Expect = 8e-48
 Identities = 117/367 (31%), Positives = 201/367 (54%), Gaps = 24/367 (6%)

Query: 4   SESGQDKTEDPTEKRKRDAREKGEVARSKEL--------NTVAVTLAGAGGLLAFGGHVA 55
           +E   D+ E  T  + + ARE+G+ A+S ++          V +T  G G +        
Sbjct: 2   AEQDLDRNEAATPYKLQRARERGQAAKSTDVVGAIVFTVAAVYLTWRGFGAVATQFRFDQ 61

Query: 56  ETLLALMRMNFSLTRDIIVDERAMGAFLLASGKMAIWAVQPVLILLFVVSFVAPIALSGF 115
             L+   RM+ S      + ERA+ A  + S         P    + + + V  +  +G 
Sbjct: 62  AVLIQAGRMDPSGAGLWPLTERALRAVFVLSA--------PFFATVMLAAVVGNMMQTGP 113

Query: 116 LFSGSLLQPKFSRMNPLSGIKRMFSMQALTELLKALAKFFVILVVAVVVLS---GDRQAL 172
           + S   ++  F+R+NP++G+KR+FSM+ L +  +AL K  ++ +V+V+ L    G    L
Sbjct: 114 MLSFDPVKMDFNRINPVNGLKRLFSMRVLFDTARALIKLTLLGLVSVLALKALLGQFYGL 173

Query: 173 LSIANEPLEQAIIHSLQVVGWSALWMSAGLLLIAAADVPFQLYQTHKKMKMTKQEVRDEY 232
            S++     + ++  L  V   AL M+  L LIA  D+ +   +  KKM+M++++++DE 
Sbjct: 174 ASLSPIGYLRTLLDDLSSV---ALKMALVLGLIALLDLMYTRREFAKKMRMSQRDIKDEA 230

Query: 233 KDSEGKPEVKQRIRQLQREVSQRRM-MAAVPDADVIITNPTHYAVALQYDPEKGGAAPLL 291
           K  +G P ++ R+R+L+RE  +R + +    +ADV+ITNPTH+AVAL+YD  +   +P L
Sbjct: 231 KHRDGDPRIRARLRELRRETLKRSLALRETRNADVLITNPTHFAVALKYDHGRM-VSPQL 289

Query: 292 LAKGSDFMALKIREIGVEHNIQILESPALARAIYYSTELEQEIPAGLYLAVAQVLAYVFQ 351
           LAKGS  MA  +REI   H I ++++P LAR +Y    ++Q +P  LY  VA+++ +VF 
Sbjct: 290 LAKGSGHMAAAMREIAARHGIPVVQNPPLARRLYRELPVDQAVPPELYAQVARIIVWVFA 349

Query: 352 IRQYRAG 358
           +R+ R G
Sbjct: 350 MREQRQG 356