Pairwise Alignments

Query, 380 a.a., flagellin export apparatus, substrate specificity protein from Pseudomonas putida KT2440

Subject, 383 a.a., flagellar type III secretion system protein FlhB from Dickeya dianthicola ME23

 Score =  301 bits (770), Expect = 3e-86
 Identities = 166/372 (44%), Positives = 237/372 (63%), Gaps = 2/372 (0%)

Query: 5   ESGQDKTEDPTEKRKRDAREKGEVARSKELNTVAVTLAGAGGLLAFGGHVAETLLALMRM 64
           +S  +KTE PT +R   ARE+G++ RS+EL +V + +AG   L   G  +A  L  +M  
Sbjct: 4   DSDLEKTEAPTPQRTEKAREEGQIPRSRELTSVFMLIAGLAILWGSGSGMAGRLTDMMAK 63

Query: 65  NFSLTRDIIVDERAMGAFLLASGKMAIWAVQPVLILLFVVSFVAPIALSGFLFSGSLLQP 124
                 + I DER + A + +  K A  A+ P+L  L +V+  AP+ L G +FS   +  
Sbjct: 64  GLIFDHNFISDERLIIAHVGSLIKQAALALVPILFGLVLVALAAPVLLGGLIFSTKAISF 123

Query: 125 KFSRMNPLSGIKRMFSMQALTELLKALAKFFVILVVAVVVLSGDRQALLSIANEPLEQAI 184
            F +MNPLSG+KRMFS   L EL KA+ K  ++  +    L  +  ++L + +EPL  AI
Sbjct: 124 DFGKMNPLSGLKRMFSTHVLAELFKAILKAIIVGCITFWFLQHNWNSMLHLVSEPLGSAI 183

Query: 185 IHSLQVVGWSALWMSAGLLLIAAADVPFQLYQTHKKMKMTKQEVRDEYKDSEGKPEVKQR 244
             +L +      W+  GL  + A DV +Q++   K+++M+KQE+RDEYK+ EG P +K R
Sbjct: 184 KDALNIALLCCFWVILGLFPMVAFDVGWQIWSHIKRLRMSKQEIRDEYKEHEGDPHIKGR 243

Query: 245 IRQLQREVSQRRMMAAVPDADVIITNPTHYAVALQYDPEKGGAAPLLLAKGSDFMALKIR 304
           IRQ QR ++QRRMMA VP ADVI+TNPTHYAVAL+YD EK   AP +LAKG+D +AL+IR
Sbjct: 244 IRQQQRAIAQRRMMADVPKADVIVTNPTHYAVALKYD-EKKMHAPKVLAKGADQIALRIR 302

Query: 305 EIGVEHNIQILESPALARAIYYSTELEQEIPAGLYLAVAQVLAYVFQIRQYRAGKGKRPE 364
           E+G EH I ILE+P LARA+Y  TE+   IP GLY AVA+VL++V+Q+++++   G  P 
Sbjct: 303 ELGSEHRIPILEAPPLARALYRHTEIGHHIPTGLYAAVAEVLSWVYQLKRWKREGGLIPR 362

Query: 365 PLKDDLPIPPDL 376
             K +LP+P  L
Sbjct: 363 KPK-NLPVPDAL 373